Kalchhauser, Irene and Kutschera, Verena E. and Burkhardt-Holm, Patricia. (2016) The complete mitochondrial genome of the invasive Ponto-Caspian goby Ponticola kessleri obtained from high-throughput sequencing using the Ion Torrent Personal Genome Machine. Mitochondrial DNA, 27 (3). pp. 1887-1889.
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Official URL: http://edoc.unibas.ch/dok/A6337964
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Abstract
We report the first complete mitochondrial genome (mitogenome) of an invasive Ponto-Caspian goby, Ponticola kessleri (bighead goby, Gu¨ nther 1891). Ion Torrent PGM sequencing oftotal DNA from two individuals yielded a contig of 16,971 bp, with overlapping ends located inthe repetitive control region, which was validated using Sanger sequencing. The finalmitogenome of Ponticola kessleri has a size of 16,890 bp and contains the expected geneconfiguration of 13 protein-coding genes, 2 rRNA genes and 22 tRNA genes. In a comparisonwith complete mitogenomes from other goby species, we identified a translocation of tRNAGluin the mitogenome of P. kessleri. Rearrangements are unique and rare events, and can thus providephylogenetic information.
Faculties and Departments: | 05 Faculty of Science > Departement Umweltwissenschaften > Integrative Biologie > Aquatische Ökologie (Holm) |
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UniBasel Contributors: | Holm, Patricia and Adrian-Kalchhauser, Irene |
Item Type: | Article, refereed |
Article Subtype: | Research Article |
Publisher: | Taylor & Francis |
ISSN: | 1940-1736 |
e-ISSN: | 1940-1744 |
Note: | Publication type according to Uni Basel Research Database: Journal article |
Language: | English |
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Last Modified: | 03 Oct 2017 06:40 |
Deposited On: | 06 Feb 2015 09:59 |
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