Browse by Basel Contributors ID

Vogel, G. and Cuénod, A. and Mouchet, R. and Strauss, A. and Daubenberger, C. and Pflueger, V. and Portevin, D.. (2018) Functional characterization and phenotypic monitoring of human hematopoietic stem cell expansion and differentiation of monocytes and macrophages by whole-cell mass spectrometry. Stem Cell Research, 26. pp. 47-54.

Olotu, Ally and Urbano, Vicente and Hamad, Ali and Eka, Martin and Chemba, Mwajuma and Nyakarungu, Elizabeth and Raso, Jose and Eburi, Esther and Mandumbi, Dolores O. and Hergott, Dianna and Maas, Carl D. and Ayekaba, Mitoha O. and Milang, Diosdado N. and Rivas, Matilde R. and Schindler, Tobias and Embon, Oscar M. and Ruben, Adam J. and Saverino, Elizabeth and Abebe, Yonas and Kc, Natasha and James, Eric R. and Murshedkar, Tooba and Manoj, Anita and Chakravarty, Sumana and Li, Minglin and Adams, Matthew and Schwabe, Christopher and Segura, J. Luis and Daubenberger, Claudia and Tanner, Marcel and Richie, Thomas L. and Billingsley, Peter F. and Lee Sim, B. Kim and Abdulla, Salim and Hoffman, Stephen L.. (2018) Advancing global health through development and clinical trials partnerships: a randomized, placebo-controlled, double-blind assessment of safety, tolerability, and Immunogenicity of Plasmodium falciparum sporozoites vaccine for malaria in healthy Equatoguinean men. American journal of tropical medicine and hygiene, 98 (1). pp. 308-318.

Kassim, Ali and Pflüger, Valentin and Premji, Zul and Daubenberger, Claudia and Revathi, Gunturu. (2017) Comparison of biomarker based Matrix Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS) and conventional methods in the identification of clinically relevant bacteria and yeast. BMC microbiology, 17. p. 128.

Mpina, Maxmillian and Maurice, Nicholas J. and Yajima, Masanao and Slichter, Chloe K. and Miller, Hannah W. and Dutta, Mukta and McElrath, M. Juliana and Stuart, Kenneth D. and De Rosa, Stephen C. and McNevin, John P. and Linsley, Peter S. and Abdulla, Salim and Tanner, Marcel and Hoffman, Stephen L. and Gottardo, Raphael and Daubenberger, Claudia A. and Prlic, Martin. (2017) Controlled human malaria infection leads to long-lasting changes in innate and innate-like lymphocyte populations. Journal of immunology (Baltimore, Md. : 1950), 199. pp. 107-118.

Rothen, Julian and Schindler, Tobias and Pothier, Joël F. and Younan, Mario and Certa, Ulrich and Daubenberger, Claudia and Pflüger, Valentin and Jores, Joerg. (2017) Draft genome sequences of seven Streptococcus agalactiae strains isolated from Camelus dromedarius at the horn of Africa. Genome Announcements, 5 (28). e00525-17.

Amelio, Patrizia and Portevin, Damien and Reither, Klaus and Mhimbira, Francis and Mpina, Maxmillian and Tumbo, Anneth and Nickel, Beatrice and Marti, Hanspeter and Knopp, Stefanie and Ding, Song and Penn-Nicholson, Adam and Darboe, Fatoumatta and Ohmiti, Khalid and Scriba, Thomas J. and Pantaleo, Giuseppe and Daubenberger, Claudia and Perreau, Matthieu. (2017) Mixed Th1 and Th2 Mycobacterium tuberculosis-specific CD4 T cell responses in patients with active pulmonary tuberculosis from Tanzania. PLoS neglected tropical diseases, 11 (7). e0005817.

Pieper, Kathrin and Tan, Joshua and Piccoli, Luca and Foglierini, Mathilde and Barbieri, Sonia and Chen, Yiwei and Silacci-Fregni, Chiara and Wolf, Tobias and Jarrossay, David and Anderle, Marica and Abdi, Abdirahman and Ndungu, Francis M. and Doumbo, Ogobara K. and Traore, Boubacar and Tran, Tuan M. and Jongo, Said and Zenklusen, Isabelle and Crompton, Peter D. and Daubenberger, Claudia and Bull, Peter C. and Sallusto, Federica and Lanzavecchia, Antonio. (2017) Public antibodies to malaria antigens generated by two LAIR1 insertion modalities. Nature, 548 (7669). pp. 597-601.

Moncunill, G. and Mpina, M. and Nhabomba, A. J. and Aguilar, R. and Ayestaran, A. and Sanz, H. and Campo, J. J. and Jairoce, C. and Barrios, D. and Dong, Y. and Diez-Padrisa, N. and Fernandes, J. F. and Sacarlal, J. and Williams, N. A. and Harezlak, J. and Mordmuller, B. and Agnandji, S. T. and Aponte, J. J. and Daubenberger, C. and Valim, C. and Dobano, C.. (2017) Distinct helper T cell type 1 and 2 responses associated with malaria protection and risk in RTS,S/AS01E vaccinees. Clinical Infectious Diseases, 65 (5). pp. 746-755.

Moncunill, Gemma and De Rosa, Stephen C. and Ayestaran, Aintzane and Nhabomba, Augusto J. and Mpina, Maximillian and Cohen, Kristen W. and Jairoce, Chenjerai and Rutishauser, Tobias and Campo, Joseph J. and Harezlak, Jaroslaw and Sanz, Héctor and Díez-Padrisa, Núria and Williams, Nana Aba and Morris, Daryl and Aponte, John J. and Valim, Clarissa and Daubenberger, Claudia and Dobaño, Carlota and McElrath, M. Juliana. (2017) RTS,S/AS01E malaria vaccine induces memory and polyfunctional T cell responses in a pediatric african phase III trial. Frontiers in Immunology, 8. p. 1008.

Sanz, Hector and Aponte, John J. and Harezlak, Jaroslaw and Dong, Yan and Ayestaran, Aintzane and Nhabomba, Augusto and Mpina, Maxmillian and Maurin, Obiang Régis and Díez-Padrisa, Núria and Aguilar, Ruth and Moncunill, Gemma and Selidji Todagbe, Agnandij and Daubenberger, Claudia and Dobaño, Carlota and Valim, Clarissa. (2017) drLumi: an open-source package to manage data, calibrate, and conduct quality control of multiplex bead-based immunoassays data analysis. PloS one, 12 (11). e0187901.

Rothen, J. and Githaka, N. and KAnduma, E. G. and Olds, C. and Pflüger, V. and Mwaura, S. and Bishop, R. P. and Daubenberger, C.. (2016) Matrix-assisted laser desorption/ionization time of flight mass spectrometry for comprehensive indexing of East African ixodid tick species. Parasites and Vectors, 9. p. 151.

Gotia, Hanzel T. and Munro, James B. and Knowles, Donald P. and Daubenberger, Claudia A. and Bishop, Richard P. and Silva, Joana C.. (2016) Absolute quantification of the host-to-parasite DNA ratio in Theileria parva-infected lymphocyte cell lines. PLoS one, 11 (3). e0150401.

Boillat-Blanco, Noémie and Ramaiya, Kaushik L. and Mganga, Maliwasa and Minja, Lilian T. and Bovet, Pascal and Schindler, Christian and Von Eckardstein, Arnold and Gagneux, Sebastien and Daubenberger, Claudia and Reither, Klaus and Probst-Hensch, Nicole. (2016) Transient hyperglycemia in patients with tuberculosis in Tanzania : implications for diabetes screening algorithms. Journal of Infectious Diseases, 213 (7). pp. 1163-1172.

Olds, Cassandra L. and Mwaura, Stephen and Odongo, David O. and Scoles, Glen A. and Bishop, Richard and Daubenberger, Claudia. (2016) Induction of humoral immune response to multiple recombinant Rhipicephalus appendiculatus antigens and their effect on tick feeding success and pathogen transmission. Parasites and Vectors, 9 (1). p. 484.

Boillat-Blanco, Noémie and Bovet, Pascal and Ramaiya, Kaushik L. and Mganga, Maliwasa and Minja, Lilian T. and Saleh, Lanja and Imboden, Medea and Schindler, Christian and Gagneux, Sebastien and Daubenberger, Claudia and Reither, Klaus and Probst-Hensch, Nicole. (2016) Association between tuberculosis, diabetes and 25 hydroxyvitamin D in Tanzania: a longitudinal case control study. BMC Infectious Diseases, 16 (1). p. 626.

Salim, Nahya and Knopp, Stefanie and Lweno, Omar and Abdul, Ummi and Mohamed, Ali and Schindler, Tobias and Rothen, Julian and Masimba, John and Kwaba, Denis and Mohammed, Alisa S. and Althaus, Fabrice and Abdulla, Salim and Tanner, Marcel and Daubenberger, Claudia and Genton, Blaise. (2015) Distribution and risk factors for Plasmodium and helminth co-infections: a cross-sectional survey among children in Bagamoyo district, coastal region of Tanzania. PLoS neglected tropical diseases, Vol. 9, H. 4 , e0003660.

Obiero, Joshua M. and Shekalaghe, Seif and Hermsen, Cornelus C. and Mpina, Maxmillian and Bijker, Else M. and Roestenberg, Meta and Teelen, Karina and Billingsley, Peter F. and Sim, B. Kim Lee and James, Eric R. and Daubenberger, Claudia A. and Hoffman, Stephen L. and Abdulla, Salim and Sauerwein, Robert W. and Scholzen, Anja. (2015) Impact of malaria preexposure on antiparasite cellular and humoral immune responses after controlled human malaria infection. Infection and immunity, Vol. 83, H. 5. pp. 2185-2196.

Portevin, Damien and Pflüger, Valentin and Otieno, Patricia and Brunisholz, René and Vogel, Guido and Daubenberger, Claudia. (2015) Quantitative whole-cell MALDI-TOF MS fingerprints distinguishes human monocyte sub-populations activated by distinct microbial ligands. BMC biotechnology, Vol. 15 , 24.

Portevin, Damien and Moukambi, Félicien and Mpina, Maxmillian and Bauer, Asli and Haraka, Frederick and Chachage, Mkunde and Metzger, Philipp and Saathoff, Elmar and Clowes, Petra and Ntinginya, Nyanda E. and Rachow, Andrea and Hoelscher, Michael and Reither, Klaus and Daubenberger, Claudia A. and Geldmacher, Christof. (2015) Maturation and mip-1β production of cytomegalovirus-specific T cell responses in Tanzanian children, adolescents and adults : impact by HIV and Mycobacterium tuberculosis co-infections. PLoS one, Vol. 10, H. 5 , e0126716.

Lenz, Nicole and Schindler, Tobias and Kagina, Benjamin M. and Zhang, Jitao David and Lukindo, Tedson and Mpina, Maxmillian and Bang, Peter and Kromann, Ingrid and Hoff, Søren T. and Andersen, Peter and Reither, Klaus and Churchyard, Gavin J. and Certa, Ulrich and Daubenberger, Claudia A.. (2015) Antiviral innate immune activation in HIV-infected adults negatively affects H1/IC31-induced vaccine-specific memory CD4+ T cells. Clinical and vaccine immunology, Vol. 22, H. 7. pp. 688-696.

Norling, Martin and Bishop, Richard P. and Pelle, Roger and Qi, Weihong and Henson, Sonal and Drábek, Elliott F. and Tretina, Kyle and Odongo, David and Mwaura, Stephen and Njoroge, Thomas and Bongcam-Rudloff, Erik and Daubenberger, Claudia A. and Silva, Joana C.. (2015) The genomes of three stocks comprising the most widely utilized live sporozoite Theileria parva vaccine exhibit very different degrees and patterns of sequence divergence. BMC genomics, Vol. 16 , 729.

Heckel, Tobias and Schmucki, Roland and Berrera, Marco and Ringshandl, Stephan and Badi, Laura and Steiner, Guido and Ravon, Morgane and Küng, Erich and Kuhn, Bernd and Kratochwil, Nicole A. and Schmitt, Georg and Kiialainen, Anna and Nowaczyk, Corinne and Daff, Hamina and Khan, Azinwi Phina and Lekolool, Isaac and Pelle, Roger and Okoth, Edward and Bishop, Richard and Daubenberger, Claudia and Ebeling, Martin and Certa, Ulrich. (2015) Functional analysis and transcriptional output of the Göttingen minipig genome. BMC genomics, 16. p. 932.

Knopp, Stefanie and Salim, Nahya and Schindler, Tobias and Karagiannis Voules, Dimitrios A. and Rothen, Julian and Lweno, Omar and Mohammed, Alisa S. and Singo, Raymond and Benninghoff, Myrna and Nsojo, Anthony A. and Genton, Blaise and Daubenberger, Claudia. (2014) Diagnostic accuracy of Kato-Katz, FLOTAC, Baermann, and PCR methods for the detection of light-intensity hookworm and Strongyloides stercoralis infections in Tanzania. American journal of tropical medicine and hygiene, Vol. 90, H. 3. pp. 535-545.

Shekalaghe, Seif and Rutaihwa, Mastidia and Billingsley, Peter F. and Chemba, Mwajuma and Daubenberger, Claudia A. and James, Eric R. and Mpina, Maximillian and Ali Juma, Omar and Schindler, Tobias and Huber, Eric and Gunasekera, Anusha and Manoj, Anita and Simon, Beatus and Saverino, Elizabeth and Church, L. W. Preston and Hermsen, Cornelus C. and Sauerwein, Robert W. and Plowe, Christopher and Venkatesan, Meera and Sasi, Philip and Lweno, Omar and Mutani, Paul and Hamad, Ali and Mohammed, Ali and Urassa, Alwisa and Mzee, Tutu and Padilla, Debbie and Ruben, Adam and Sim, B. Kim Lee and Tanner, Marcel and Abdulla, Salim and Hoffman, Stephen L.. (2014) Controlled human malaria infection of Tanzanians by intradermal injection of aseptic, purified, cryopreserved Plasmodium falciparum sporozoites. American journal of tropical medicine and hygiene, Vol. 91, H. 3. pp. 471-480.

Portevin, Damien and Moukambi, Felicien and Clowes, Petra and Bauer, Asli and Chachage, Mkunde and Ntinginya, Nyanda E. and Mfinanga, Elirehema and Said, Khadija and Haraka, Frederick and Rachow, Andrea and Saathoff, Elmar and Mpina, Maximilian and Jugheli, Levan and Lwilla, Fred and Marais, Ben J. and Hoelscher, Michael and Daubenberger, Claudia and Reither, Klaus and Geldmacher, Christof. (2014) Assessment of the novel T-cell activation marker-tuberculosis assay for diagnosis of active tuberculosis in children : a prospective proof-of-concept study. The Lancet infectious diseases, Vol. 14, H. 10. pp. 931-938.

Reither, Klaus and Katsoulis, Lynn and Beattie, Trevor and Gardiner, Nicolene and Lenz, Nicole and Said, Khadija and Mfinanga, Elirehema and Pohl, Christian and Fielding, Katherine L. and Jeffery, Hannah and Kagina, Benjamin M. and Hughes, Elisabeth J. and Scriba, Thomas J. and Hanekom, Willem A. and Hoff, Søren T. and Bang, Peter and Kromann, Ingrid and Daubenberger, Claudia and Andersen, Peter and Churchyard, Gavin J.. (2014) Safety and immunogenicity of H1/IC31®, an adjuvanted TB subunit vaccine, in HIV-infected adults with CD4+ lymphocyte counts greater than 350 cells/mm3 : a phase II, multi-centre, double-blind, randomized, placebo-controlled trial. PLoS one, Vol. 9, H. 12 , e114602.

Salim, Nahya and Schindler, Tobias and Abdul, Ummi and Rothen, Julian and Genton, Blaise and Lweno, Omar and Mohammed, Alisa S. and Masimba, John and Kwaba, Denis and Abdulla, Salim and Tanner, Marcel and Daubenberger, Claudia and Knopp, Stefanie. (2014) Enterobiasis and strongyloidiasis and associated co-infections and morbidity markers in infants, preschool- and school-aged children from rural coastal Tanzania : a cross-sectional study. BMC infectious diseases, Vol. 14 , 644.

Mwakasungula, Solomon and Schindler, Tobias and Jongo, Said and Moreno, Elena and Kamaka, Kasimu and Mohammed, Mgeni and Joseph, Selina and Rashid, Ramla and Athuman, Thabit and Tumbo, Anneth Mwasi and Hamad, Ali and Lweno, Omar and Tanner, Marcel and Shekalaghe, Seif and Daubenberger, Claudia A.. (2014) Red blood cell indices and prevalence of hemoglobinopathies and glucose 6 phosphate dehydrogenase deficiencies in male Tanzanian residents of Dar es Salaam. International journal of molecular epidemiology and genetics, Vol. 5, H. 4. pp. 185-194.

Fischer, Anne and Liljander, Anne and Kaspar, Heike and Muriuki, Cecilia and Fuxelius, Hans-Henrik and Bongcam-Rudloff, Erik and de Villiers, Etienne P. and Huber, Charlotte A. and Frey, Joachim and Daubenberger, Claudia and Bishop, Richard and Younan, Mario and Jores, Joerg. (2013) Camel Streptococcus agalactiae populations are associated with specific disease complexes and acquired the tetracycline resistance gene tetM via a Tn916-like element. Veterinary research, Vol. 44 , 86.

Olds, C. and Bishop, R. and Daubenberger, C.. (2013) Anti-tick vaccines for the control of ticks affecting livestock. In: Molecular vaccines : from prophylaxis to therapy, Vol. 1. Wien, pp. 295-311.

Olds, C. and Mwaura, S. and Crowder, D. and Odongo, D. and van Oers, M. and Owen, J. and Bishop, R. and Daubenberger, C.. (2012) Immunization of cattle with Ra86 impedes Rhipicephalus appendiculatus nymphal-to-adult molting. Ticks and tick-borne diseases, Vol. 3, H. 3. pp. 170-178.

Henson, S. and Bishop, R. P. and Morzaria, S. and Spooner, P. R. and Pelle, R. and Poveda, L. and Ebeling, M. and Kung, E. and Certa, U. and Daubenberger, C. A. and Qi, W.. (2012) High-resolution genotyping and mapping of recombination and gene conversion in the protozoan Theileria parva using whole genome sequencing. BMC genomics, Vol. 13 , 503.

Daubenberger, C. A.. (2012) First clinical trial of purified, irradiated malaria sporozoites in humans. Expert review of vaccines, Vol. 11, H. 1. pp. 31-33.

Huber, C. A. and McOdimba, F. and Pflueger, V. and Daubenberger, C. A. and Revathi, G.. (2011) Characterisation of invasive and colonizing isolates of Streptococcus agalactiae in East African adults. Journal of clinical microbiology, Vol. 49, H. 10. pp. 3652-3655.

Cech, Patrick Georges and Aebi, Thomas and Abdallah, Mwanajaa Shomari and Mpina, Maxmillian and Machunda, Ester Barnabas and Westerfeld, Nicole and Stoffel, Sabine Alexandra and Zurbriggen, Rinaldo and Pluschke, Gerd and Tanner, Marcel and Daubenberger, Claudia and Genton, Blaise and Abdulla, Salim. (2011) Virosome-formulated Plasmodium falciparum AMA-1 & CSP derived peptides as malaria vaccine : randomized phase 1b trial in semi-immune adults & children. PLoS one, Vol. 6, H. 7 , e22273.

Daubenberger, C. A.. (2010) Gene-expression analysis for prediction of RTS,S-induced protection in humans. Expert review of vaccines, Vol. 9, H. 5. pp. 465-469.

Kopp, Nadja and Diaz, Diana and Amacker, Mario and Odongo, David O. and Beier, Konstantin and Nitsch, Cordula and Bishop, Richard P. and Daubenberger, Claudia A.. (2010) Identification of a synthetic peptide inducing cross-reactive antibodies binding to Rhipicephalus (Boophilus) decoloratus, Rhipicephalus (Boophilus) microplus, Hyalomma anatolicum anatolicum and Rhipicephalus appendiculatus BM86 homologues. Vaccine : the official journal of the International Society for Vaccines, 28 (1). pp. 261-269.