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Symanczik, Sarah and Gisler, Michelle and Thonar, Cécile and Schlaeppi, Klaus and Van der Heijden, Marcel and Kahmen, Ansgar and Boller, Thomas and Mäder, Paul. (2017) Application of Mycorrhiza and Soil from a Permaculture System Improved Phosphorus Acquisition in Naranjilla. Frontiers in Plant Science, 8. p. 1263.

Koegel, Sally and Mieulet, Delphine and Baday, Sefer and Chatagnier, Odile and Lehmann, Moritz F. and Wiemken, Andres and Boller, Thomas and Wipf, Daniel and Bernèche, Simon and Guiderdoni, Emmanuel and Courty, Pierre-Emmanuel. (2017) Phylogenetic, structural, and functional characterization of AMT3;1, an ammonium transporter induced by mycorrhization among model grasses. Mycorrhiza, 27 (7). pp. 695-708.

Calabrese, Silvia and Kohler, Annegret and Niehl, Annette and Veneault-Fourrey, Claire and Boller, Thomas and Courty, Pierre-Emmanuel. (2017) Transcriptome analysis of the Populus trichocarpa-Rhizophagus irregularis Mycorrhizal Symbiosis: Regulation of Plant and Fungal Transportomes under Nitrogen Starvation. Plant & Cell Physiology, 58 (6). pp. 1003-1017.

Klauser, Dominik and Flury, Pascale and Boller, Thomas and Merker, Sebastian. (2016) Looking BAK again: Is an old acquaintance of innate immunity involved in the detection of herbivores? Plant Signaling & Behavior, 11 (11). e1252014.

Mbengue, Malick and Bourdais, Gildas and Gervasi, Fabio and Beck, Martina and Zhou, Ji and Spallek, Thomas and Bartels, Sebastian and Boller, Thomas and Ueda, Takashi and Kuhn, Hannah and Robatzek, Silke. (2016) Clathrin-dependent endocytosis is required for immunity mediated by pattern recognition receptor kinases. Proceedings of the National Academy of Sciences of the United States of America, 113 (39). pp. 11034-11039.

Calabrese, Silvia and Pérez-Tienda, Jacob and Ellerbeck, Matthias and Arnould, Christine and Chatagnier, Odile and Boller, Thomas and Schüßler, Arthur and Brachmann, Andreas and Wipf, Daniel and Ferrol, Nuria and Courty, Pierre-Emmanuel. (2016) GintAMT3 - a Low-Affinity Ammonium Transporter of the Arbuscular Mycorrhizal Rhizophagus irregularis. Frontiers in Plant Science, 7. p. 679.

Zvereva, Anna S. and Golyaev, Victor and Turco, Silvia and Gubaeva, Ekaterina G. and Rajeswaran, Rajendran and Schepetilnikov, Mikhail V. and Srour, Ola and Ryabova, Lyubov A. and Boller, Thomas and Pooggin, Mikhail M.. (2016) Viral protein suppresses oxidative burst and salicylic acid-dependent autophagy and facilitates bacterial growth on virus-infected plants. New Phytologis, 211 (3). pp. 1020-1034.

Niehl, Annette and Wyrsch, Ines and Boller, Thomas and Heinlein, Manfred. (2016) Double-stranded RNAs induce a pattern-triggered immune signaling pathway in plants. New Phytologist, 211 (3). pp. 1008-1019.

Walder, Florian and Boller, Thomas and Wiemken, Andres and Courty, Pierre-Emmanuel. (2016) Regulation of plants' phosphate uptake in common mycorrhizal networks: Role of intraradical fungal phosphate transporters. Plant Signaling & Behavior, 11 (2). e1131372.

Symanczik, Sarah and Courty, Pierre-Emmanuel and Boller, Thomas and Wiemken, Andres and Al-Yahya'ei, Mohamed N.. (2015) Impact of water regimes on an experimental community of four desert arbuscular mycorrhizal fungal (AMF) species, as affected by the introduction of a non-native AMF species. Mycorrhiza, 25 (8). pp. 639-647.

Klauser, Dominik and Desurmont, Gaylord A. and Glauser, Gaétan and Vallat, Armelle and Flury, Pascale and Boller, Thomas and Turlings, Ted C. J. and Bartels, Sebastian. (2015) The Arabidopsis Pep-PEPR system is induced by herbivore feeding and contributes to JA-mediated plant defence against herbivory. Journal Of Experimental Botany, 66 (17). pp. 5327-5336.

Gully, Kay and Hander, Tim and Boller, Thomas and Bartels, Sebastian. (2015) Perception of Arabidopsis AtPep peptides, but not bacterial elicitors, accelerates starvation-induced senescence. Frontiers in plant science, Vol. 6, H. 14. p. 10.

Boycheva, Svetlana and Dominguez, Ana and Rolcik, Jakub and Boller, Thomas and Fitzpatrick, Teresa B.. (2015) Consequences of a deficit in vitamin B6 biosynthesis de novo for hormone homeostasis and root development in Arabidopsis. Plant physiology, Vol. 167, H. 1. pp. 102-117.

Lori, Martina and van Verk, Marcel C. and Hander, Tim and Schatowitz, Hendrik and Klauser, Dominik and Flury, Pascale and Gehring, Christoph A. and Boller, Thomas and Bartels, Sebastian. (2015) Evolutionary divergence of the plant elicitor peptides (Peps) and their receptors : interfamily incompatibility of perception but compatibility of downstream signalling. Journal Of Experimental Botany, Vol. 66, no. 17. pp. 5315-5325.

Wyrsch, Ines and Domínguez-Ferreras, Ana and Geldner, Niko and Boller, Thomas. (2015) Tissue-specific FLAGELLIN-SENSING 2 (FLS2) expression in roots restores immune responses in Arabidopsis fls2 mutants. The new phytologist, Vol. 206, H. 2. pp. 774-784.

Walder, Florian and Brulé, Daphnée and Koegel, Sally and Wiemken, Andres and Boller, Thomas and Courty, Pierre-Emmanuel. (2015) Plant phosphorus acquisition in a common mycorrhizal network : regulation of phosphate transporter genes of the Pht1 family in sorghum and flax. The new phytologist, Vol. 205, H. 4. pp. 1632-1645.

Bartels, Sebastian and Boller, Thomas. (2015) Quo vadis, Pep? Plant elicitor peptides at the crossroads of immunity, stress and development. Journal Of Experimental Botany, Vol. 66, no. 17. pp. 5183-5193.

Hristova, Emilija and Fal, Kateryna and Klemme, Laurin and Windels, David and Bucher, Etienne. (2015) HISTONE DEACETYLASE6 Controls Gene Expression Patterning and DNA Methylation-Independent Euchromatic Silencing. Plant Physiology , 168 (4). pp. 1298-1308.

Beck, Martina and Wyrsch, Ines and Strutt, James and Wimalasekera, Rinukshi and Webb, Alex and Boller, Thomas and Robatzek, Silke. (2014) Expression patterns of FLAGELLIN SENSING 2 map to bacterial entry sites in plant shoots and roots. Journal Of Experimental Botany, 65 (22). pp. 6487-6498.

Krajinski, F. and Courty, P. E. and Sieh, D. and Franken, P. and Zhang, H. Q. and Bucher, M. and Gerlach, N. and Kryvoruchko, I. and Zoeller, D. and Udvardi, M. and Hause, B.. (2014) The H+-ATPase HA1 of Medicago truncatula Is Essential for Phosphate Transport and Plant Growth during Arbuscular Mycorrhizal Symbiosis. The plant cell, Vol. 26, H. 4. pp. 1808-1817.

Symanczik, Sarah and Blaszkowski, Janusz and Koegel, Sally and Boller, Thomas and Wiemken, Andres and Al-Yahya'ei, Mohamed N.. (2014) Isolation and identification of desert habituated arbuscular mycorrhizal fungi newly reported from the Arabian Peninsula. Journal of arid land, Vol. 6, H. 4. pp. 488-497.

Symanczik, S. and Blaszkowski, J. and Chwat, G. and Boller, T. and Wiemken, A. and Al-Yahya'ei, M. N.. (2014) Three new species of arbuscular mycorrhizal fungi discovered at one location in a desert of Oman : Diversispara omaniana, Septoglomus nakheelum and Rhizophagus arabicus. Mycologia, Vol. 106, no. 2. pp. 243-259.

Gupta, R. and Mathimaran, N. and Wiemken, A. and Boller, T. and Bisaria, V. S. and Sharma, S.. (2014) Non-target effects of bioinoculants on rhizospheric microbial communities of Cajanus cajan. Applied soil ecology, Vol. 76. pp. 26-33.

Windels, D. and Bielewicz, D. and Ebneter, M. and Jarmolowski, A. and Szweykowska-Kulinska, Z. and Vazquez, F.. (2014) miR393 Is Required for Production of Proper Auxin Signalling Outputs. PLoS one, Vol. 9, H. 4 , e95972.

Flury, Pascale and Klauser, Dominik and Schulze, Birgit and Boller, Thomas and Bartels, Sebastian. (2013) The anticipation of danger: microbe-associated molecular pattern perception enhances AtPep-triggered oxidative burst. Plant physiology, Vol. 161, H. 4. pp. 2023-2035.

Koegel, Sally and Ait Lahmidi, Nassima and Arnould, Christine and Chatagnier, Odile and Walder, Florian and Ineichen, Kurt and Boller, Thomas and Wipf, Daniel and Wiemken, Andres and Courty, Pierre-Emmanuel. (2013) The family of ammonium transporters (AMT) in Sorghum bicolor : two AMT members are induced locally, but not systemically in roots colonized by arbuscular mycorrhizal fungi. The new phytologist, Vol. 198, H. 3. pp. 853-865.

Koegel, S. and T. Boller, M. F. Lehmann and Wiemken, A.. (2013) Rapid nitrogen transfer in the Sorghum bicolor : glomus mosseae arbuscular mycorrhizal symbiosis. Plant signaling & behavior, Vol. 8, H. 8 , e25229.

Klauser, Dominik and Flury, Pascale and Boller, Thomas and Bartels, Sebastian. (2013) Several MAMPs, including chitin fragments, enhance AtPep-triggered oxidative burst independently of wounding. Plant signaling & behavior, Vol. 8, H. 9 , e25346.

Kørner, Camilla Julie and Klauser, Dominik and Niehl, Annette and Domínguez-Ferreras, Ana and Chinchilla, Delphine and Boller, Thomas and Heinlein, Manfred and Hann, Dagmar. (2013) The immunity regulator BAK1 contributes to resistance against diverse RNA viruses. Molecular plant-microbe interactions, Vol. 26, H. 11. pp. 1271-1280.

Albert, Markus and Jehle, Anna Kristina and Fürst, Ursula and Chinchilla, Delphine and Boller, Thomas and Felix, Georg. (2013) A two-hybrid-receptor assay demonstrates heteromer formation as switch-on for plant immune receptors. Plant physiology, Vol. 163, H. 4. pp. 1504-1509.

Hann, Dagmar R. and Domínguez-Ferreras, Ana and Motyka, Vaclav and Dobrev, Petre I. and Schornack, Sebastian and Jehle, Anna and Felix, Georg and Chinchilla, Delphine and Rathjen, John P. and Boller, Thomas. (2013) The Pseudomonas type III effector HopQ1 activates cytokinin signaling and interferes with plant innate immunity. New phytologist, Vol. 201, H. 2 , S. 585–598.

Walder, Florian and Niemann, Helge and Lehmann, Moritz F. and Boller, Thomas and Wiemken, Andres and Courty, Pierre-Emmanuel. (2013) Tracking the carbon source of arbuscular mycorrhizal fungi colonizing C-3 and C-4 plants using carbon isotope ratios (delta C-13). Soil biology & biochemistry, Vol. 58. pp. 341-344.

Tian, Ye and Liu, Wei and Cai, Jie and Zhang, Lan-Yue and Wong, Kam-Bo and Feddermann, Nadja and Boller, Thomas and Xie, Zhi-Ping and Staehelin, Christian. (2013) The Nodulation Factor Hydrolase of Medicago truncatula : Characterization of an Enzyme Specifically Cleaving Rhizobial Nodulation Signals. Plant physiology, Vol. 163, H. 3. pp. 1179-1190.

Uroz, S. and Courty, P. E. and Pierrat, J. C. and Peter, M. and Buee, M. and Turpault, M. P. and Garbaye, J. and Frey-Klett, P.. (2013) Functional Profiling and Distribution of the Forest Soil Bacterial Communities Along the Soil Mycorrhizosphere Continuum. Microbial ecology, Vol. 66, H. 2. pp. 404-415.

Meyer, Joana Beatrice and Song-Wilson, Yi and Foetzki, Andrea and Luginbuehl, Carolin and Winzeler, Michael and Kneubuehler, Yvan and Matasci, Caterina and Mascher-Frutschi, Fabio and Kalinina, Olena and Boller, Thomas and Keel, Christoph and Maurhofer, Monika. (2013) Does Wheat Genetically Modified for Disease Resistance Affect Root-Colonizing Pseudomonads and Arbuscular Mycorrhizal Fungi? PLoS One, 8 (1). e53825.

Walder, F. and Niemann, H. and Natarajan, M. and Lehmann, M. F. and Boller, T. and Wiemken, A.. (2012) Mycorrhizal Networks : Common Goods of Plants Shared under Unequal Terms of Trade. Plant physiology, Vol. 159, H. 2. pp. 789-797.

Xin, D. W. and Liao, S. and Xie, Z. P. and Hann, D. R. and Steinle, L. and Boller, T. and Staehelin, C.. (2012) Functional analysis of NopM, a novel E3 ubiquitin ligase (NEL) domain effector of Rhizobium sp strain NGR234. PLoS Pathogens, Vol. 8, H. 5 , e1002707.

Mathimaran, N. and Srivastava, R. and Wiemken, A. and Sharma, A. K. and Boller, T.. (2012) Genome sequences of two plant growth-promoting fluorescent Pseudomonas strains, R62 and R81. Journal of bacteriology, Vol. 194, H. 12. pp. 3272-3273.

Lopez-Gomez, M. and Sandal, N. and Stougaard, J. and Boller, T.. (2012) Interplay of flg22-induced defence responses and nodulation in Lotus japonicus. Journal of Experimental Botany, Vol. 63, no. 1. pp. 393-401.

Mueller, K. and Chinchilla, D. and Albert, M. and Jehle, A. K. and Kalbacher, H. and Boller, T. and Felix, G.. (2012) Contamination risks in work with synthetic peptides: flg22 as an example of a pirate in commercial peptide Preparations. The plant cell, Vol. 24, H. 8. pp. 3193-3197.

Mueller, K. and Bittel, P. and Chinchilla, D. and Jehle, A. K. and Albert, M. and Boller, T. and Felix, G.. (2012) Chimeric FLS2 receptors eveal the basis for differential flagellin perception in Arabidopsis and tomato. The plant cell, Vol. 24, H. 5. pp. 2213-2224.

Singh, P. and Kuo, Y. C. and Mishra, S. and Tsai, C. H. and Chien, C. C. and Chen, C. W. and Desclos-Theveniau, M. and Chu, P. W. and Schulze, B. and Chinchilla, D. and Boller, T. and Zimmerli, L.. (2012) The Lectin Receptor Kinase-VI.2 is required for priming and positively regulates Arabidopsis pattern-triggered immunity. The plant cell, Vol. 24, H. 3. pp. 1256-1270.

Sun, W. X. and Cao, Y. R. and Labby, K. J. and Bittel, P. and Boller, T. and Bent, A. F.. (2012) Probing the Arabidopsis flagellin receptor : FLS2-FLS2 association and the contributions of specific domains to signaling function. The plant cell, Vol. 24, H. 3. pp. 1096-1113.

Courty, P. E. and Walder, F. and Boller, T. and Ineichen, K. and Wiemken, A. and Rousteau, A. and Selosse, M. A.. (2011) Carbon and nitrogen metabolism in mycorrhizal networks and mycoheterotrophic plants of tropical forests: A stable isotope analysis. Plant physiology, Vol. 156, H. 2. pp. 952-961.

Blom, D. and Fabbri, C. and Connor, E. C. and Schiestl, F. P. and Klauser, Dominik. and Boller, Thomas and Eberl, L. and Weisskopf, L.. (2011) Production of plant growth modulating volatiles is widespread among rhizosphere bacteria and strongly depends on culture conditions. Environmental Microbiology, 13 (11). pp. 3047-3058.

Foetzki, A. and Winzeler, M. and Boller, Thomas and Felber, F. and Gruissem, W. and Keel, C. and Keller, B. and Mascher, F. and Maurhofer, M. and Nentwig, W. and Romeis, J. and Sautter, C. and Schmid, B. and Bigler, F.. (2011) Field trials with genetically modified powdery mildew-resistant wheat. Agrarforschung Schweiz, 2 (10). pp. 446-453.

Schulze B, Mentzel T. and Jehle AK, Mueller K. and Beeler S, Boller T. and Felix G, Chinchilla D.. (2010) Rapid heteromerization and phosphorylation of ligand-activated plant transmembrane receptors and their associated kinase BAK1. Journal of biological chemistry, Vol. 285 , no. 13. pp. 9444-9451.

Jeworutzki, E. and Roelfsema, M. R. G. and Anschutz, U. and Krol, E. and Elzenga, J. T. M. and Felix, G. and Boller, T. and Hedrich, R. and Becker, D.. (2010) Early signaling through the Arabidopsis pattern recognition receptors FLS2 and EFR involves Ca; 2+; -associated opening of plasma membrane anion channels. >>The<< Plant Journal, Vol. 62, H. 3. pp. 367-378.

Hildermann, I. and Messmer, M. and Dubois, D. and Boller, T. and Wiemken, A. and Mäder, P.. (2010) Nutrient use efficiency and arbuscular mycorrhizal root colonisation of winter wheat cultivars in different farming systems of the DOK long-term trial. Journal of the Science of Food and Agriculture, Vol. 90, H. 12. pp. 2027-2038.

Feddermann, N. and Finlay, R. and Boller, T. and Elfstrand, M.. (2010) Functional diversity in arbuscular mycorrhiza - the role of gene expression, phosphorous nutrition and symbiotic efficiency. Fungal Ecology, Vol. 3, H. 1. pp. 1-8.

Yamamoto, S. and Lüscher, M. and Hochstrasser, U. and Boller, T. and Wiemken, A.. (2010) Mode of synthesis of long-chain fructan in timothy haplocorm. Grassland Science, Vol. 56, H. 4. pp. 194-197.

Krol, E. and Mentzel, T. and Chinchilla, D. and Boller, T. and Felix, G. and Kemmerling, B. and Postel, S. and Arents, M. and Jeworutzki, E. and Al-Rasheid, K. A. S. and Becker, D. and Hedrich, R.. (2010) Perception of the Arabidopsis danger signal peptide 1 involves the pattern recognition receptor AtPEPR1 and Its close homologue AtPEPR2. Journal of biological chemistry, Vol. 285, H. 18. pp. 13471-13479.

Lu, X. and Tintor, N. and Mentzel, T. and Kombrink, E. and Boller, T. and Robatzek, S. and Schulze-Lefert, P. and Saijo, Y.. (2009) Uncoupling of sustained MAMP receptor signaling from early outputs in an Arabidopsis endoplasmic reticulum glucosidase II allele. Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 52. pp. 22522-22527.

Ritsema, T. and Brodmann, D. and Diks, S. H. and Bos, C. L. and Nagaraj, V. and Pieterse, C. M. J. and Boller, T. and Wiemken, A. and Peppelenbosch, M. P.. (2009) Are small GTPases signal hubs in sugar-mediated induction of fructan biosynthesis? PLoS one, Vol. 4, H. 8 , e6605.

Oehl, F. and Sieverding, E. and Ineichen, K. and Mäder, P. and Wiemken, A. and Boller, T.. (2009) Distinct sporulation dynamics of arbuscular mycorrhizal fungal communities from different agroecosystems in long-term microcosms. Agriculture, ecosystems and environment, Vol. 134, H. 3-4. pp. 257-268.

Boller, T. and He, S. Y.. (2009) Innate immunity in plants : an arms race between pattern recognition receptors in plants and effectors in microbial pathogens. Science, Vol. 324, H. 5928. pp. 742-744.

Altenbach, D. and Rudino-Pinera, E. and Olvera, C. and Boller, T. and Wiemken, A. and Ritsema, T.. (2009) An acceptor-substrate binding site determining glycosyl transfer emerges from mutant analysis of a plant vacuolar invertase and a fructosyltransferase. Plant molecular biology, Vol. 69, H. 1-2. pp. 47-56.

Boller, T. and Felix, G.. (2009) A renaissance of elicitors : perception of microbe-associated molecular patterns and danger signals by pattern-recognition receptors. Annual review of plant biology, Vol. 60. pp. 379-406.

Hildermann, I. and Thommen, A. and Dubois, D. and Boller, T. and Wiemken, A. and Mäder, P.. (2009) Yield and baking quality of winter wheat cultivars in different farming systems of the DOK long-term trials. Journal of the science of food and agriculture, Vol. 89, H. 14. pp. 2477-2491.

Aslam, S. N. and Erbs, G. and Morrissey, K. L. and Newman, M. A. and Chinchilla, D. and Boller, T. and Molinaro, A. and Jackson, R. W. and Cooper, R. M.. (2009) Microbe-associated molecular pattern (MAMP) signatures, synergy, size and charge : influences on perception or mobility and host defence responses. Molecular plant pathology, Vol. 10, H. 3. pp. 375-387.

Boboye, B. and Nyakatura, G. and Rosenthal, A. and Perret, X. and Broughton, W. J. and Boller, T.. (2009) Sequence analysis of a DNA fragment from Sinorhizobium fredii USDA257 which extends the nitrogen fixation host range of Rhizobium species NGR234 to soybean, Glycine max (L.) Merr cultivar Peking. Symbiosis, Vol. 48, H. 1-3. pp. 110-119.

Aslam, Shazia N. and Newman, Mari-Anne and Erbs, Gitte and Morrissey, Kate L. and Chinchilla, Delphine and Boller, Thomas and Jensen, Tina Tandrup and De Castro, Cristina and Ierano, Teresa and Molinaro, Antonio and Jackson, Robert W. and Knight, Marc R. and Cooper, Richard M.. (2008) Bacterial polysaccharides suppress induced innate immunity by calcium chelation. Current biology, Vol. 18, H. 14. pp. 1078-1083.

Göhre, V. and Spallek, T. and Haeweker, H. and Mersmann, S. and Mentzel, T. and Boller, T. and de Torres, M. and Mansfield, J. W. and Robatzek, S.. (2008) Plant pattern-recognition receptor FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB. Current biology, Vol. 18, H. 23. pp. 1824-1832.

Vazquez, Franck and Blevins, Todd and Ailhas, Jérôme and Boller, Thomas and Meins, Frederick. (2008) Evolution of Arabidopsis MIR genes generates novel microRNA classes. Nucleic Acids Research, 36 (20). pp. 6429-6438.

Mathimaran, N. and Falquet, L. and Ineichen, K. and Picard, C. and Redecker, D. and Boller, T. and Wiemken, A.. (2008) Microsatellites for disentangling underground networks : strain-specific identification of Glomus intraradices, an arbuscular mycorrhizal fungus. Fungal genetics and biology, Vol. 45, H. 6. pp. 812-817.

Mathimaran, N. and Falquet, L. and Ineichen, K. and Picard, C. and Redecker, D. and Wiemken, A. and Boller, T.. (2008) Unexpected vagaries of microsatellite loci in Glomus intraradices : length polymorphisms are rarely caused by variation in repeat number only. New phytologist, Vol. 180. pp. 568-570.

Book Section

Chinchilla, Delphine and Boller, Thomas. (2012) Innate immunity : pattern recognition in plants. In: Effectors in plant-microbe interactions. Chichester, pp. 3-32.

Boller, Thomas and Flury, Pascale. (2012) Peptides as danger signals : MAMPs and DAMPs. In: Plant signaling peptides. Heidelberg, pp. 163-181.

Hann, Dagmar and Boller, Thomas. (2012) Microbial effectors and their role in plant defense suppression. In: Effectors in plant-microbe interactions. Chichester, pp. 33-52.

Boller, Thomas. (2012) Experimental evidence of a role for RLKs in innate immunity. In: Receptor-like kinases in plants : from development to defense. Heidelberg, pp. 67-78.