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Duneau, David and Ebert, Dieter and Du Pasquier, Louis. (2016) Infections by Pasteuria do not protect its natural host Daphnia magna from subsequent infections. Developmental and comparative immunology, 57. pp. 120-125.

Ebert, Dieter and Duneau, David and Hall, Matthew D. and Luijckx, Pepijn and Andras, Jason P. and Du Pasquier, Louis and Ben-Ami, Frida. (2016) A Population Biology Perspective on the Stepwise Infection Process of the Bacterial Pathogen Pasteuria ramosa in Daphnia. Advances in Parasitology , 91. pp. 265-310.

Chipman, Ariel D. and Ferrier, David E. K. and Brena, Carlo and Qu, Jiaxin and Hughes, Daniel S. T. and Schröder, Reinhard and Torres-Oliva, Montserrat and Znassi, Nadia and Jiang, Huaiyang and Almeida, Francisca C. and Alonso, Claudio R. and Apostolou, Zivkos and Aqrawi, Peshtewani and Arthur, Wallace and Barna, Jennifer C. J. and Blankenburg, Kerstin P. and Brites, Daniela and Capella-Gutiérrez, Salvador and Coyle, Marcus and Dearden, Peter K. and Du Pasquier, Louis and Duncan, Elizabeth J. and Ebert, Dieter and Eibner, Cornelius and Erikson, Galina and Evans, Peter D. and Extavour, Cassandra G. and Francisco, Liezl and Gabaldón, Toni and Gillis, William J. and Goodwin-Horn, Elizabeth A. and Green, Jack E. and Griffiths-Jones, Sam and Grimmelikhuijzen, Cornelis J. P. and Gubbala, Sai and Guigó, Roderic and Han, Yi and Hauser, Frank and Havlak, Paul and Hayden, Luke and Helbing, Sophie and Holder, Michael and Hui, Jerome H. L. and Hunn, Julia P. and Hunnekuhl, Vera S. and Jackson, LaRonda and Javaid, Mehwish and Jhangiani, Shalini N. and Jiggins, Francis M. and Jones, Tamsin E. and Kaiser, Tobias S. and Kalra, Divya and Kenny, Nathan J. and Korchina, Viktoriya and Kovar, Christie L. and Kraus, F. Bernhard and Lapraz, François and Lee, Sandra L. and Lv, Jie and Mandapat, Christigale and Manning, Gerard and Mariotti, Marco and Mata, Robert and Mathew, Tittu and Neumann, Tobias and Newsham, Irene and Ngo, Dinh N. and Ninova, Maria and Okwuonu, Geoffrey and Ongeri, Fiona and Palmer, William J. and Patil, Shobha and Patraquim, Pedro and Pham, Christopher and Pu, Ling-Ling and Putman, Nicholas H. and Rabouille, Catherine and Ramos, Olivia Mendivil and Rhodes, Adelaide C. and Robertson, Helen E. and Robertson, Hugh M. and Ronshaugen, Matthew and Rozas, Julio and Saada, Nehad and Sánchez-Gracia, Alejandro and Scherer, Steven E. and Schurko, Andrew M. and Siggens, Kenneth W. and Simmons, DeNard and Stief, Anna and Stolle, Eckart and Telford, Maximilian J. and Tessmar-Raible, Kristin and Thornton, Rebecca and van der Zee, Maurijn and von Haeseler, Arndt and Williams, James M. and Willis, Judith H. and Wu, Yuanqing and Zou, Xiaoyan and Lawson, Daniel and Muzny, Donna M. and Worley, Kim C. and Gibbs, Richard A. and Akam, Michael and Richards, Stephen. (2014) The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede strigamia maritima. PLoS biology, 12 (11). e1002005.

Du Pasquier, Louis. (2014) Evolution of the immune system. Reference Module in Biomedical Sciences.

Brites, D. and Brena, C. and Ebert, D. and Du Pasquier, L.. (2013) More than one way to produce protein diversity: duplication and limited alternative splicing of an adhesion molecule gene in basal arthropods. Evolution, 67 (10). pp. 2999-3011.

Zhang, C. and Du Pasquier, L. and Hsu, E.. (2013) Shark IgW C region diversificatin through RNA processing and isotype switching. Journal of immunology, Vol. 191, H. 6. pp. 3410-3418.

Zhu, C. and Lee, V. and Finn, A. and Senger, K. and Du Pasquier, L. and Hsu, E.. (2012) Origin of immunoglobulin isotype switching. Current Biology, 22 (10). pp. 872-880.

Luickx, P. and Ben-Ami, F. and Mouton, L. and Du Pasquier, L. and Ebert, D.. (2011) Cloning of the unculturable parasite Pasteuria ramosa and its Daphnia host reveals extreme genotype-genotype interactions. Ecology letters, 14 (2). pp. 125-131.

Brites, D. and Encinas-Viso, F. and Ebert, D. and Du Pasquier, L. and Haag, C. R.. (2011) Population genetics of duplicated alternatively spliced exons of the dscam gene in Daphnia and Drosophila. PLoS one, Vol. 6, H. 12 , e27947.

McElroy, Kerensa and Mouton, Laurence and Du Pasquier, Louis and Qi, Weihong and Ebert, Dieter . (2011) Characterisation of a large family of polymorphic collagen-like proteins in the endospore-forming bacterium Pasteuria ramosa. Research in Microbiology, 162 (7). pp. 701-714.

Santos, M. E. and Athanasiadis, A. and Leitao, A. B. and Du Pasquier, L. and Sucena, E.. (2011) Alternative splicing and gene duplication in the evolution of the FoxP gene subfamily. Molecular Biology and Evolution , 28 (1). pp. 237-247.

Boudinot, R. and van der Aa, L. M. and Jouneau, L. and Du Pasquier, L. and Pnontarotti, P. and Birolat, V. and Benmansour, A. and Levraud, L. P.. (2011) Origin and evolution of TRIM proteins: New insights from the complete TRIM repertoire of zebrafish and pufferfish. PLoS One, 6 (7). e22022.

Santos, M. E. and Athanasiadis, A. and Leitao, A. B. and Du Pasquier, L. and Sucena, E.. (2010) Alternative splicing and gene duplication in the evolution of the FoxP gene sub-family. Molecular biology and evolution, Vol. 28, H. 1. pp. 237-247.

Vertlboeck, B. C. and Gick, C. M. and Schmitt, R. and Du Pasquier, L. and Göbel, T. W.. (2010) Complexity of expressed CHIR genes. Developmental and comparative immunology, Vol. 34, H. 8. pp. 866-873.

Hofmann, J. and Greter, M. and Du Pasquier, L. and Becher, B.. (2010) B-cells need a proper house, whereas T-cells are happy in a cave : the dependence of lymphocytes on secondary lymphoid tissues during evolution. Trends in immunology, Vol. 31, H. 4. pp. 144-153.

Moné, Y. and Gourbal, B. and Duval, D. and Du Pasquier, L. and Kieffer-Jaquinod, S. and Mitta, G.. (2010) A large repertoire of parasite epitopes matched by a large repertoire of host immune receptors in an invertebrate host/parasite model. PLoS neglected tropical diseases, Vol. 4, H. 9 , e813.

Gauthier, M. E. and Du Pasquier, L. and Degnan, B. M.. (2010) The genome of the sponge Amphimedon queenslandica provides new perspectives into the origin of Toll-like and interleukin 1 receptor pathways. Evolution and development, Vol. 12, Nr. 5. pp. 519-533.

Denoeud, F. and Henriet, S. and Mungpakdee, S. and Aury, J. M. and Da Silva, C. and Brinkmann, H. and Mikhaleva, J. and Olsen, L. C. and Jubin, C. and Canestro, C. and Bouquet, J. M. and Danks, G. and Poulin, J. and CampsteiJn, C. and Adamski, M. and Cross, I. and Yadetie, F. and Muffato, M. and Louis, A. and Butcher, S. and Tsagkogeorga, G. and Konrad, A. and Singh, S. and Jensen, M. F. and Cong, E. H. and Eikeseth-Otteraa, H. and Noel, B. and Antourard, V. and Procel, B. M. and Kachouri-LAfond, R. and Nishino, A. and Ugolini, M. and Chourrout, P. and Nishida, H. and Aasland, R. and Huzurbazar, S. and Westhof, E. and Lehrach, H. and Reinhardt, R. and Weissenbach, J. and Roy, S. W. and Delsuc, F. and Artiguenave, F. and Postlethwait, J. H. and Manak, J. R. and Thompson, E. M. and Jaillon, O. and Du Pasquier, L. and Boudinot, P. and Liberles, D. A. and Volff, J. N. and Philippe, H. and Lenhard, B. and Crollius, H. R. and Wincker, P. and Chourrout, D.. (2010) Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate. Science, Vol. 330, H. 6009. pp. 1381-1385.

Glaberman, S. and Du Pasquier, L. and Caccone, A.. (2009) Characterization of a nonclassical class I MHC gene in a reptile, the Galapagos marine iguana (Amblyrhynchus cristatus). PLoS one, Vol. 3, H. 8 , e2859.

Daëron, M. and Jaeger, S. and Du Pasquier, L. and Vivier, E.. (2009) Immunoreceptor tyrosine-based inhibition motifs : a quest in the past and future. Immunological reviews, Vol. 224, H. 1. pp. 11-43.

Hansen, JD. and Du Pasquier, L. and Lefranc, MP. and Lopez, V. and Benmansour, A. and Boudinot, P.. (2009) The B7 family of immunoregulatory receptors: a comparative and evolutionary perspective. Molecular Immunology, Vol. 46, H. 3. pp. 457-472.

Zucchetti, I. and De Santis, R. and Grusea, S. and Pontarotti, P. and Du Pasquier, L.. (2009) Origin and evolution of the vertebrate leukocyte receptors: the lesson from tunicates. Immunogenetics, Vol. 61 , No. 6. pp. 463-481.

Du Pasquier, L.. (2009) Metazoa immune receptors diversification during evolution. Médecine sciences, Vol. 25 H. 3. pp. 273-280.

Du Pasquier, Louis and Wilson, Melanie and Sammut, Benedicte. (2009) The fate of duplicated immunity genes in the dodecaploid Xenopus ruwenzoriensis. Frontiers in Bioscience, Vol. 14. pp. 177-191.

Zucchetti, I. and Marino, R. and Pinto, MR. and Lambris, JD. and Du Pasquier, L. and De Santis, R.. (2009) CiCD94-1, an ascidian multipurpose C-type lectin-like receptor expressed in Ciona intestinalis hemocytes and larval neural structures. Differentiation, Vol. 76, no. 3. pp. 267-282.

Colson, I. and Du Pasquier, L. and Ebert, D.. (2009) Intragenic tandem repeats in Daphnia magna: structure, function and distribution. BMC Research Notes, Vol. 2 , 206, 6 S..

Du Pasquier, L.. (2009) Fish 'n' TRIMs : [minireview]. Journal of biology, Vol. 8 , Art. 50, 5 S..

Mouton, L. and Traunecker, E. and McElroy, K. and Du Pasquier, L. and Ebert, D.. (2009) Identification of a polymorphic collagen-like protein in the crustacean bacteria Pasteuria ramosa. Research in microbiology, Vol. 160. pp. 792-799.

Chesneau, A. and Sachs, LM. and Chai, N. and Chen, Y. and Du Pasquier, L. and Loeber, J. : Pollet and N., Reilly and Weeks, DL. and Bronchain, OJ.. (2008) Transgenesis procedures in Xenopus. Biology of the cell, Vol. 100 , No. 9. pp. 503-521.

Brites, D. and McTaggart, S. and Morris, K. and Anderson, J. and Thomas, K. and Colson, I. and Fabbro, T. and Little, T. J. and Ebert, D. and Du Pasquier, L.. (2008) The Dscam homologue of the crustacean Daphnia is diversified by alternative splicing like in insects. Molecular biology and evolution, 25 (7). pp. 1429-1439.