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Manfredi, Pablo. Capnocytophaga canimorsus : genomic characterization of a specialised host-dependent lifestyle and implications in pathogenesis. 2012, Doctoral Thesis, University of Basel, Faculty of Science.

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Harms, Alexander and Segers, Francisca H. I. D. and Quebatte, Maxime and Mistl, Claudia and Manfredi, Pablo and Körner, Jonas and Chomel, Bruno B. and Kosoy, Michael and Maruyama, Soichi and Engel, Philipp and Dehio, Christoph. (2017) Evolutionary Dynamics of Pathoadaptation Revealed by Three Independent Acquisitions of the VirB/D4 Type IV Secretion System in Bartonella. Genome biology and evolution, 9 (3). pp. 761-776.

Trebosc, Vincent and Gartenmann, Sarah and Royet, Kevin and Manfredi, Pablo and Tötzl, Marcus and Schellhorn, Birgit and Pieren, Michel and Tigges, Marcel and Lociuro, Sergio and Sennhenn, Peter C. and Gitzinger, Marc and Bumann, Dirk and Kemmer, Christian. (2016) A novel genome editing platform for drug resistant Acinetobacter baumannii revealed an AdeR-unrelated tigecycline resistance mechanism. Antimicrobial Agents and Chemotherapy, 60 (12). pp. 7263-7271.

Manfredi, Pablo and Jenal, Urs. (2015) Bacteria in the CF Lung: Isolation Drives Diversity. Cell host & microbe, Vol. 18, H. 3. pp. 268-269.

Ozaki, Shogo and Schalch-Moser, Annina and Zumthor, Ludwig and Manfredi, Pablo and Ebbensgaard, Anna and Schirmer, Tilman and Jenal, Urs. (2014) Activation and polar sequestration of PopA, a c-di-GMP effector protein involved in Caulobacter crescentus cell cycle control. Molecular Microbiology, 94 (3). pp. 580-594.

Ittig, Simon and Lindner, Buko and Stenta, Marco and Manfredi, Pablo and Zdorovenko, Evelina and Knirel, Yuriy A. and Dal Peraro, Matteo and Cornelis, Guy R. and Zähringer, Ulrich. (2012) The Lipopolysaccharide from Capnocytophaga canimorsus Reveals an Unexpected Role of the Core-Oligosaccharide in MD-2 Binding. PLoS Pathogens, Vol. 8, H. 5 , e1002667.

Malone, J. G. and Jaeger, T. and Manfredi, P. and Dötsch, A. and Blanka, A. and Bos, R. and Cornelis, G. R. and Häussler, S. and Jenal, U.. (2012) The YfiBNR signal transduction mechanism reveals novel targets for the evolution of persistent pseudomonas aeruginosa in cystic fibrosis airways. PLoS Pathogens, Vol. 8, H. 6 , e1002760.

Manfredi, Pablo and Pagni, Marco and Cornelis, Guy R.. (2011) Complete genome sequence of the dog commensal and human pathogen Capnocytophaga canimorsus strain 5. Journal of bacteriology, Vol. 193, H. 19. pp. 5558-5559.

Renzi, Francesco and Manfredi, Pablo and Mally, Manuela and Moes, Suzanne and Jenö, Paul and Cornelis, Guy R.. (2011) The N-glycan Glycoprotein Deglycosylation Complex (Gpd) from Capnocytophaga canimorsus Deglycosylates Human IgG. PLoS Pathogens, Vol. 7, H. 6 , e1002118.