Items where Division is "05 Faculty of Science > Departement Umweltwissenschaften > Integrative Biologie > Evolutionary Biology (Salzburger)"

Article

Baalsrud, Helle Tessand and Voje, Kjetil Lysne and Tørresen, Ole Kristian and Solbakken, Monica Hongrø and Matschiner, Michael and Malmstrøm, Martin and Hanel, Reinhold and Salzburger, Walter and Jakobsen, Kjetill S. and Jentoft, Sissel. (2017) Evolution of Hemoglobin Genes in Codfishes Influenced by Ocean Depth. Scientific Reports, 7 (1). p. 7956.

Bachmann, Judith C. and Cortesi, Fabio and Hall, Matthew D. and Marshall, N. Justin and Salzburger, Walter and Gante, Hugo F.. (2017) Real-time social selection maintains honesty of a dynamic visual signal in cooperative fish. Evolution Letters, 1 (5). pp. 269-278.

Baldo, Laura and Pretus, Joan Lluís and Riera, Joan Lluís and Musilova, Zuzana and Bitja Nyom, Arnold Roger and Salzburger, Walter. (2017) Convergence of gut microbiotas in the adaptive radiations of African cichlid fishes. ISME Journal, 11 (9). pp. 1975-1987.

Berner, Daniel and Ammann, Matthias and Spencer, Eleanor and Rüegg, Attila and Lüscher, Daniel and Moser, Dario. (2017) Sexual isolation promotes divergence between parapatric lake and stream stickleback. Journal of Evolutionary Biology, 30. pp. 401-411.

Egger, Bernd and Roesti, Marius and Böhne, Astrid and Roth, Olivia and Salzburger, Walter. (2017) Demography and genome divergence of lake and stream populations of an East African cichlid fish. Molecular Ecology, 26 (19). pp. 5016-5030.

Keller, Isabel S. and Salzburger, Walter and Roth, Olivia. (2017) Parental investment matters for maternal and offspring immune defense in the mouthbrooding cichlid Astatotilapia burtoni. BMC Evolutionary Biology , 17 (1). p. 264.

Lauber, Chris and Seitz, Stefan and Mattei, Simone and Suh, Alexander and Beck, Jürgen and Herstein, Jennifer and Börold, Jacob and Salzburger, Walter and Kaderali, Lars and Briggs, John A. G. and Bartenschlager, Ralf. (2017) Deciphering the Origin and Evolution of Hepatitis B Viruses by Means of a Family of Non-enveloped Fish Viruses. Cell Host & Microbe, 22 (3). pp. 387-399.e6.

Spinks, Rachel K. and Muschick, Moritz and Salzburger, Walter and Gante, Hugo F.. (2017) Singing above the chorus: cooperative Princess cichlid fish (Neolamprologus pulcher) has high pitch. Hydrobiologia, 791. pp. 115-125.

Stieb, Sara M. and Cortesi, Fabio and Sueess, Lorenz and Carleton, Karen L. and Salzburger, Walter and Marshall, N. J.. (2017) Why UV vision and red vision are important for damselfish (Pomacentridae): structural and expression variation in opsin genes. Molecular Ecology, 26 (5). pp. 1323-1342.

Theis, Anya and Roth, Olivia and Cortesi, Fabio and Ronco, Fabrizia and Salzburger, Walter and Egger, Bernd. (2017) Variation of anal fin egg-spots along an environmental gradient in a haplochromine cichlid fish. Evolution: International Journal of Organic Evolution, 71 (3). pp. 766-777.

Böhne, Astrid and Wilson, Catherine A. and Postlethwait, John H. and Salzburger, Walter. (2016) Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni. BMC genomics, 17 (1). p. 883.

Cortesi, Fabio and Musilová, Zuzana and Stieb, Sara M. and Hart, Nathan S. and Siebeck, Ulrike E. and Cheney, Karen L. and Salzburger, Walter and Marshall, N. Justin. (2016) From crypsis to mimicry: changes in colour and the configuration of the visual system during ontogenetic habitat transitions in a coral reef fish. The Journal of experimental biology, 219 (16). pp. 2545-2558.

Gante, Hugo F. and Matschiner, Michael and Malmstrøm, Martin and Jakobsen, Kjetill S. and Jentoft, Sissel and Salzburger, Walter. (2016) Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika. Molecular Ecology, 25 (24). pp. 6143-6161.

Göppert, Carolin and Harris, Rayna M. and Theis, Anya and Boila, Anna and Hohl, Simon and Rüegg, Attila and Hofmann, Hans A. and Salzburger, Walter and Böhne, Astrid. (2016) Inhibition of Aromatase Induces Partial Sex Change in a Cichlid Fish: Distinct Functions for Sex Steroids in Brains and Gonads. Sexual development : genetics, molecular biology, evolution, endocrinology, embryology, and pathology of sex determination and differentiation, 10 (2). pp. 97-110.

Malinsky, Milan and Salzburger, Walter. (2016) Environmental context for understanding the iconic adaptive radiation of cichlid fishes in Lake Malawi. Proceedings of the National Academy of Sciences of the United States of America, 113 (42). pp. 11654-11656.

Malmstrøm, Martin and Matschiner, Michael and Tørresen, Ole K. and Star, Bastiaan and Snipen, Lars G. and Hansen, Thomas F. and Baalsrud, Helle T. and Nederbragt, Alexander J. and Hanel, Reinhold and Salzburger, Walter and Stenseth, Nils C. and Jakobsen, Kjetill S. and Jentoft, Sissel. (2016) Evolution of the immune system influences speciation rates in teleost fishes. Nature Genetics, 48 (10). pp. 1204-1210.

Matschiner, Michael and Musilová, Zuzana and Barth, Julia M. I. and Starostová, Zuzana and Salzburger, Walter and Steel, Mike and Bouckaert, Remco. (2016) Bayesian Phylogenetic Estimation of Clade Ages Supports Trans-Atlantic Dispersal of Cichlid Fishes. Systematic Biology, 66 (1). pp. 3-22.

Meyer, Britta S. and Matschiner, Michael and Salzburger, Walter. (2016) Disentangling Incomplete Lineage Sorting and Introgression to Refine Species-Tree Estimates for Lake Tanganyika Cichlid Fishes. Systematic Biology, 66 (4). pp. 531-550.

Moser, D. and Frey, A. and Berner, D.. (2016) Fitness differences between parapatric lake and stream stickleback revealed by a field transplant. Journal of Evolutionary Biology, 29 (4). pp. 711-719.

Santos, M. Emília and Baldo, Laura and Gu, Langyu and Boileau, Nicolas and Musilova, Zuzana and Salzburger, Walter. (2016) Comparative transcriptomics of anal fin pigmentation patterns in cichlid fishes. BMC genomics, 17. p. 712.

Stange, Madlen and Aguirre-Fernández, Gabriel and Cooke, Richard G. and Barros, Tito and Salzburger, Walter and Sánchez-Villagra, Marcelo R.. (2016) Evolution of opercle bone shape along a macrohabitat gradient: species identification using mtDNA and geometric morphometric analyses in neotropical sea catfishes (Ariidae). Ecology and Evolution , 6 (16). pp. 5817-5830.

Stieb, Sara M. and Carleton, Karen L. and Cortesi, Fabio and Marshall, N. Justin and Salzburger, Walter. (2016) Depth-dependent plasticity in opsin gene expression varies between damselfish (Pomacentridae) species. Molecular Ecology, 25 (15). pp. 3645-3661.

Stieb, Sara M. and Cortesi, Fabio and Sueess, Lorenz and Carleton, Karen L. and Salzburger, Walter and Marshall, N. Justin. (2016) Why UV- and red-vision are important for damselfish (Pomacentridae): Structural and expression variation in opsin genes. Molecular Ecology , 26 (5). pp. 1323-1342.

Verheyen, Erik and Abila, R. and Akoll, P. and Albertson, C. and Antunes, D. and Banda, T. and Bills, R. and Bulirani, A. and Manda, A. Chocha and Cohen, A. S. and Cunha-Saraiva, F. and Derycke, S. and Donohue, I. and Du, M. and Dudu, A. M. and Egger, B. and Fritzsche, K. and Frommen, J. G. and Gante, H. F. and Genner, M. J. and Haerer, A. and Hata, H. and Irvine, K. and Mwapu, P. Isumbisho and de Bisthoven, L. Janssens and Jungwirth, A. and Kaleme, P. and Katongo, C. and Kever, L. and Koblmueller, S. and Konings, A. and Lamboj, A. and Lemmel-Schaedelin, F. and Schiaffino, G. Machado and Martens, K. and Mulungula, P. Masilya and Meyer, A. and More, H. L. and Musilova, Z. and Bukinga, F. Muterezi and Muzumani, R. and Ntakimazi, G. and Okello, W. and Phiri, H. and Pialek, L. and Plisnier, P. D. and Raeymaekers, J. A. M. and Rajkov, J. and Rican, O. and Roberts, R. and Salzburger, W. and Schoen, I. and Sefc, K. M. and Singh, P. and Skelton, P. and Snoeks, J. and Schneider, K. and Sturmbauer, C. and Svardal, H. and Svensson, O. and Dowdall, J. Torres and Turner, G. F. and Tyers, A. and van Rijssel, J. C. and Van Steenberge, M. and Vanhove, M. P. M. and Verheyen, E. and Weber, A. -T. and Weyl, O. and Ziegelbecker, A. and Zimmermann, H.. (2016) Oil extraction imperils Africa`s Great Lakes. Science, 354 (6312). pp. 561-562.

Wilson, Laura A. B. and Colombo, Marco and Sánchez-Villagra, Marcelo R. and Salzburger, Walter. (2015) Evolution of opercle shape in cichlid fishes from Lake Tanganyika - adaptive trait interactions in extant and extinct species flocks. Scientific Reports, 5. p. 16909.

Lorin, Thibault and Salzburger, Walter and Böhne, Astrid. (2015) Evolutionary Fate of the Androgen Receptor-Signaling Pathway in Ray-Finned Fishes with a Special Focus on Cichlids. Geochemistry, geophysics, geosystems, 5 (11). pp. 2275-2283.

Boileau, Nicolas and Cortesi, Fabio and Egger, Bernd and Muschick, Moritz and Indermaur, Adrian and Theis, Anya and Büscher, Heinz H. and Salzburger, Walter. (2015) A complex mode of aggressive mimicry in a scale-eating cichlid fish. Biology letters, 11 (9). p. 20150521.

Berner, Daniel and Salzburger, Walter. (2015) The genomics of organismal diversification illuminated by adaptive radiations. Trends in Genetics, 31 (9). pp. 491-499.

Buonerba, Luca and Zaccara, Serena and Delmastro, Giovanni B. and Lorenzoni, Massimo and Salzburger, Walter and Gante, Hugo F.. (2015) Intrinsic and extrinsic factors act at different spatial and temporal scales to shape population structure, distribution and speciation in Italian Barbus (Osteichthyes: Cyprinidae). Molecular phylogenetics and evolution, 89. pp. 115-129.

Baldo, Laura and Riera, Joan Lluís and Tooming-Klunderud, Ave and Albà, M. Mar and Salzburger, Walter. (2015) Gut Microbiota Dynamics during Dietary Shift in Eastern African Cichlid Fishes. PLoS one, 10 (5). e0127462.

Wilkinson, G. S. and Breden, F. and Mank, J. E. and Ritchie, M. G. and Higginson, A. D. and Radwan, J. and Jaquiery, J. and Salzburger, W. and Arriero, E. and Barribeau, S. M. and Phillips, P. C. and Renn, S. C. P. and Rowe, L.. (2015) The locus of sexual selection: moving sexual selection studies into the post-genomics era. Journal of evolutionary biology, 28 (4). pp. 739-755.

Cortesi, Fabio and Feeney, William E. and Ferrari, Maud C. O. and Waldie, Peter A. and Phillips, Genevieve A. C. and McClure, Eva C. and Sköld, Helen N. and Salzburger, Walter and Marshall, N. Justin and Cheney, Karen L.. (2015) Phenotypic plasticity confers multiple fitness benefits to a mimic. Current biology, 25 (7). pp. 949-954.

Meyer, Britta S. and Indermaur, Adrian and Ehrensperger, Xenia and Egger, Bernd and Banyankimbona, Gaspard and Snoeks, Jos and Salzburger, Walter. (2015) Back to Tanganyika: a case of recent trans-species-flock dispersal in East African haplochromine cichlid fishes. Royal Society open science, 2 (3). p. 140498.

Berner, Daniel and Thibert-Plante, X.. (2015) How mechanisms of habitat preference evolve and promote divergence with gene flow. Journal of Evolutionary Biology, 28 (9). pp. 1641-1655.

Colombo, Marco and Damerau, Malte and Hanel, Reinhold and Salzburger, Walter and Matschiner, Michael. (2015) Diversity and disparity through time in the adaptive radiation of Antarctic notothenioid fishes. Journal of evolutionary biology, 28 (2). pp. 376-394.

Cortesi, Fabio and Musilová, Zuzana and Stieb, Sara M. and Hart, Nathan S. and Siebeck, Ulrike E. and Malmstrøm, Martin and Tørresen, Ole K. and Jentoft, Sissel and Cheney, Karen L. and Marshall, N. Justin and Carleton, Karen L. and Salzburger, Walter. (2015) Ancestral duplications and highly dynamic opsin gene evolution in percomorph fishes. Proceedings of the National Academy of Sciences of the United States of America, 112 (5). pp. 1493-1498.

Meyer, Britta S. and Matschiner, Michael and Salzburger, Walter. (2015) A tribal level phylogeny of Lake Tanganyika cichlid fishes based on a genomic multi-marker approach. Molecular phylogenetics and evolution, 83. pp. 56-71.

Moser, D. and Kueng, B. and Berner, D.. (2015) Lake-stream divergence in stickleback life history: a plastic response to trophic niche differentiation? Evolutionary Biology, 42 (3). pp. 328-338.

Roesti, M. and Kueng, B. and Moser, D. and Berner, D.. (2015) The genomics of ecological vicariance in threespine stickleback fish. Nature Communications, 6. p. 10229.

Berner, Daniel and Moser, Dario and Roesti, Marius and Buescher, Heinz and Salzburger, Walter. (2014) Genetic architecture of skeletal evolution in European lake and stream stickleback. Evolution: International Journal of Organic Evolution, 68 (6). pp. 1792-1805.

Brawand, David and Wagner, Catherine E. and Li, Yang I. and Malinsky, Milan and Keller, Irene and Fan, Shaohua and Simakov, Oleg and Ng, Alvin Y. and Lim, Zhi Wei and Bezault, Etienne and Turner-Maier, Jason and Johnson, Jeremy and Alcazar, Rosa and Noh, Hyun Ji and Russell, Pamela and Aken, Bronwen and Alföldi, Jessica and Amemiya, Chris and Azzouzi, Naoual and Baroiller, Jean-François and Barloy-Hubler, Frederique and Berlin, Aaron and Bloomquist, Ryan and Carleton, Karen L. and Conte, Matthew A. and D'Cotta, Helena and Eshel, Orly and Gaffney, Leslie and Galibert, Francis and Gante, Hugo F. and Gnerre, Sante and Greuter, Lucie and Guyon, Richard and Haddad, Natalie S. and Haerty, Wilfried and Harris, Rayna M. and Hofmann, Hans A. and Hourlier, Thibaut and Hulata, Gideon and Jaffe, David B. and Lara, Marcia and Lee, Alison P. and MacCallum, Iain and Mwaiko, Salome and Nikaido, Masato and Nishihara, Hidenori and Ozouf-Costaz, Catherine and Penman, David J. and Przybylski, Dariusz and Rakotomanga, Michaelle and Renn, Suzy C. P. and Ribeiro, Filipe J. and Ron, Micha and Salzburger, Walter and Sanchez-Pulido, Luis and Santos, M. Emilia and Searle, Steve and Sharpe, Ted and Swofford, Ross and Tan, Frederick J. and Williams, Louise and Young, Sarah and Yin, Shuangye and Okada, Norihiro and Kocher, Thomas D. and Miska, Eric A. and Lander, Eric S. and Venkatesh, Byrappa and Fernald, Russell D. and Meyer, Axel and Ponting, Chris P. and Streelman, J. Todd and Lindblad-Toh, Kerstin and Seehausen, Ole and Di Palma, Federica. (2014) The genomic substrate for adaptive radiation in African cichlid fish. Nature, Vol. 513, H. 7518. pp. 375-381.

Böhne, Astrid and Sengstag, Thierry and Salzburger, Walter. (2014) Comparative transcriptomics in East African cichlids reveals sex- and species-specific expression and new candidates for sex differentiation in fishes. Genome biology and evolution, 6 (9). pp. 2567-2585.

Faria, Rui and Renaut, Sebastien and Galindo, Juan and Pinho, Catarina and Melo-Ferreira, José and Melo, Martim and Jones, Felicity and Salzburger, Walter and Schluter, Dolph and Butlin, Roger. (2014) Advances in Ecological Speciation : an integrative approach. Molecular ecology, Vol. 23, no. 3. pp. 513-521.

Heule, Corina and Göppert, Carolin and Salzburger, Walter and Böhne, Astrid. (2014) Genetics and timing of sex determination in the East African cichlid fish Astatotilapia burtoni. BMC genetics, Vol. 15, H. 12. p. 140.

Heule, Corina and Salzburger, Walter and Böhne, Astrid. (2014) Genetics of sexual development : an evolutionary playground for fish. Genetics, 196 (3). pp. 579-591.

Muschick, Moritz and Nosil, Patrik and Roesti, Marius and Dittmann, Marie Theres and Harmon, Luke and Salzburger, Walter. (2014) Testing the stages model in the adaptive radiation of cichlid fishes in East African Lake Tanganyika. Proceedings of the Royal Society : Series B, Biological sciences, Vol. 281, no. 1795 , 20140605.

Roesti, Marius and Gavrilets, Sergey and Hendry, Andrew P. and Salzburger, Walter and Berner, Daniel. (2014) The genomic signature of parallel adaptation from shared genetic variation. Molecular Ecology, 23 (16). pp. 3944-3956.

Roesti, Marius and Salzburger, Walter. (2014) Natural selection: it's a many-small world after all. Current biology, Vol. 24, H. 19 , R959-962.

Salzburger, Walter and Van Bocxlaer, Bert and Cohen, Andrew S.. (2014) Ecology and evolution of the african great lakes and their Faunas. Annual review of ecology, evolution and systematics, Vol. 45. pp. 519-545.

Santos, M. Emília and Braasch, Ingo and Boileau, Nicolas and Meyer, Britta S. and Sauteur, Loïc and Böhne, Astrid and Belting, Heinz-Georg and Affolter, Markus and Salzburger, Walter. (2014) The evolution of cichlid fish egg-spots is linked with a cis-regulatory change. Nature communications, Vol. 5 , Article Nr. 5149. p. 5149.

Theis, Anya and Ronco, Fabrizia and Indermaur, Adrian and Salzburger, Walter and Egger, Bernd. (2014) Adaptive divergence between lake and stream populations of an East African cichlid fish. Molecular ecology, Vol. 23, H. 21. pp. 5304-5322.

Böhne, Astrid and Heule, Corina and Boileau, Nicolas and Salzburger, Walter. (2013) Expression and sequence evolution of aromatase cyp19a1 and other sexual development genes in East African cichlid fishes. Molecular biology and evolution, Vol. 30, no. 10. pp. 2268-2285.

Colombo, Marco and Diepeveen, Eveline T. and Muschick, Moritz and Santos, M. Emilia and Indermaur, Adrian and Boileau, Nicolas and Barluenga, Marta and Salzburger, Walter. (2013) The ecological and genetic basis of convergent thick-lipped phenotypes in cichlid fishes. Molecular ecology, Vol. 22, no. 3. pp. 670-684.

Damerau, M. and Matschiner, M. and Salzburger, W. and Hanel, R.. (2013) Population divergences despite long pelagic larval stages: lessons from crocodile icefishes (Channichthyidae). Molecular ecology, Vol. 23, no. 2 , S. 284–299.

Diepeveen, Eveline T. and Kim, Fabienne D. and Salzburger, Walter. (2013) Sequence analyses of the distal-less homeobox gene family in East African cichlid fishes reveal signatures of positive selection. BMC Evolutionary Biology, Vol. 13 , 153.

Diepeveen, Eveline T. and Roth, Olivia and Salzburger, Walter. (2013) Immune-related functions of the hivep gene family in east african cichlid fishes. Geochemistry, geophysics, geosystems, Vol. 3, H. 12. pp. 2205-2217.

Mateus, Catarina S. and Stange, Madlen and Berner, Daniel and Roesti, Marius and Quintella, Bernardo R. and Alves, M. Judite and Almeida, Pedro R. and Salzburger, Walter. (2013) Strong genome-wide divergence between sympatric European river and brook lampreys. Current Biology, 23 (15). R649-R650.

Roesti, M. and Moser, D. and Berner, D.. (2013) Recombination in the threespine stickleback genome - patterns and consequences. Molecular ecology, Vol. 22, no. 11. pp. 3014-3027.

Wilson, Laura A. B. and Colombo, Marco and Hanel, Reinhold and Salzburger, Walter and Sánchez-Villagra, Marcelo R.. (2013) Ecomorphological disparity in an adaptive radiation: opercular bone shape and stable isotopes in Antarctic icefishes. Ecology and evolution, Vol. 3, H. 9. pp. 3166-3182.

Berner, Daniel. (2012) How much can the orientation of G's eigenvectors tell us about genetic constraints? Ecology and evolution, Vol. 2, H. 8. pp. 1834-1842.

Damerau, Malte and Matschiner, Michael and Salzburger, Walter and Hanel, Reinhold. (2012) Comparative population genetics of seven notothenioid fish species reveals high levels of gene flow along ocean currents in the southern Scotia Arc, Antarctica. Polar biology, Vol. 35, H. 7. pp. 1073-1086.

Diepeveen, Eveline T. and Salzburger, Walter. (2012) Two decades of molecular ecology: where are we and where are we heading. Molecular ecology, Vol. 21, no. 23 , S. 5656–5659.

Egger, Bernd and Sefc, Kristina M. and Makasa, Lawrence and Sturmbauer, Christian and Salzburger, Walter. (2012) Introgressive hybridization between color morphs in a population of cichlid fishes twelve years after human-induced secondary admixis. Journal of Heredity, Vol. 103, H. 4. pp. 515-522.

Gante, Hugo F. and Salzburger, Walter. (2012) Evolution: cichlid models on the runaway to speciation. Current biology, Vol. 22, H. 22 , R956-958.

Loh, Yong-Hwee E. and Bezault, Etienne and Muenzel, Frauke M. and Roberts, Reade B. and Swofford, Ross and Barluenga, Marta and Kidd, Celeste E. and Howe, Aimee E. and Di Palma, Federica and Lindblad-Toh, Kerstin and Hey, Jody and Seehausen, Ole and Salzburger, Walter and Kocher, Thomas D. and Streelman, J. Todd. (2012) Origins of shared genetic variation in African cichlids. Molecular biology and evolution, Vol. 30, no. 4. pp. 906-917.

Marie, Theres Dittmann and Roesti, Marius and Indermaur, Adrian and Colombo, Marco and Gschwind, Martin and Keller, Isabel and Kovac, Robin and Barluenga, Marta and Salzburger, Walter. (2012) Depth-dependent abundance of Midas Cichlid fish (Amphilophus spp.) in two Nicaraguan crater lakes. Hydrobiologia, Vol. 686, H. 1. pp. 277-285.

Meyer, Britta S. and Salzburger, Walter. (2012) A novel primer set for multilocus phylogenetic inference in East African cichlid fishes. Molecular ecology resources, Vol. 12, H. 6. pp. 1097-1104.

Moser, Dario and Roesti, Marius and Berner, Daniel. (2012) Repeated Lake-Stream Divergence in Stickleback Life History within a Central European Lake Basin. PloS one, Vol. 7, H. 12 , e50620.

Muschick, Moritz and Indermaur, Adrian and Salzburger, Walter. (2012) Convergent Evolution within an Adaptive Radiation of Cichlid Fishes. Current biology, Vol. 22, H. 24. pp. 2362-2368.

Roesti, Marius and Hendry, Andrew P. and Salzburger, Walter and Berner, Daniel. (2012) Genome divergence during evolutionary diversification as revealed in replicate lake-stream stickleback population pairs. Molecular ecology, Vol. 21, no. 12. pp. 2852-2862.

Roesti, Marius and Salzburger, Walter and Berner, Daniel. (2012) Uninformative polymorphisms bias genome scans for signatures of selection. BMC evolutionary biology, Vol. 12 , 94.

Roth, Olivia and Keller, Isabel and Landis, Susanne H. and Salzburger, Walter and Reusch, Thorsten B. H.. (2012) Hosts are ahead in a marine host-parasite coevolutionary arms race: innate immune system adaptation in pipefish Syngnathus typhle against Vibrio phylotypes. Evolution : international journal of organic evolution, Vol. 66, no. 8. pp. 2528-2539.

Santos, M. Emília and Salzburger, Walter. (2012) Evolution. How cichlids diversify. Science, Vol. 338, H. 6107. pp. 619-621.

Theis, Anya and Salzburger, Walter and Egger, Bernd. (2012) The function of anal fin egg-spots in the cichlid fish Astatotilapia burtoni. PloS one, Vol. 7, H. 1 , e29878.

Baldo, Laura and Santos, M. Emília and Salzburger, Walter. (2011) Comparative transcriptomics of Eastern African cichlid fishes shows signs of positive selection and a large contribution of untranslated regions to genetic diversity. Genome biology and evolution, Vol. 3. pp. 443-455.

Berner, D. and Kaeuffer, R. and Grandchamp, A. -C. and Raeymaekers, J. A. M. and Räsänen, K. and Hendry, A. P.. (2011) Quantitative genetic inheritance of morphological divergence in a lake-stream stickleback ecotype pair: implications for reproductive isolation. Journal of evolutionary biology, Vol. 24, H. 9. pp. 1975-1983.

Berner, Daniel. (2011) Size correction in biology: how reliable are approaches based on (common) principal component analysis? Oecologia, Vol. 166, H. 4. pp. 961-971.

Diepeveen, Eveline T. and Salzburger, Walter. (2011) Molecular characterization of two endothelin pathways in East African cichlid fishes. Journal of molecular evolution, Vol. 73, H. 5-6. pp. 355-368.

Egger, Bernd and Klaefiger, Yuri and Theis, Anya and Salzburger, Walter. (2011) A sensory bias has triggered the evolution of egg-spots in cichlid fishes. PLoS one, Vol. 6, H. 10 , e25601.

Engel, Philipp and Salzburger, Walter and Liesch, Marius and Chang, Chao-Chin and Maruyama, Soichi and Lanz, Christa and Calteau, Alexandra and Lajus, Aurélie and Médigue, Claudine and Schuster, Stephan C. and Dehio, Christoph. (2011) Parallel evolution of a type IV secretion system in radiating lineages of the host-restricted bacterial pathogen Bartonella. PLoS Genetics, 7 (2). e1001296.

Gunter, Helen M. and Clabaut, Céline and Salzburger, Walter and Meyer, Axel. (2011) Identification and characterization of gene expression involved in the coloration of cichlid fish using microarray and qRT-PCR approaches. Journal of molecular evolution, Vol. 72, H. 2. pp. 127-137.

Heule, C. and Salzburger, W.. (2011) The ontogenetic development of egg-spots in the haplochromine cichlid fish Astatotilapia burtoni. Journal of fish biology, Vol. 78, H. 5. pp. 1588-1593.

Koblmüller, Stephan and Salzburger, Walter and Obermüller, Beate and Eigner, Eva and Sturmbauer, Christian and Sefc, Kristina M.. (2011) Separated by sand, fused by dropping water : habitat barriers and fluctuating water levels steer the evolution of rock-dwelling cichlid populations in Lake Tanganyika. Molecular ecology, Vol. 20, no. 11. pp. 2272-2290.

Kuales, Georg and De Mulder, Katrien and Glashauser, Jade and Salvenmoser, Willi and Takashima, Shigeo and Hartenstein, Volker and Berezikov, Eugene and Salzburger, Walter and Ladurner, Peter. (2011) Boule-like genes regulate male and female gametogenesis in the flatworm Macrostomum lignano. Developmental biology, Vol. 357, H. 1. pp. 117-132.

Matschiner, Michael and Hanel, Reinhold and Salzburger, Walter. (2011) On the origin and trigger of the notothenioid adaptive radiation. PLoS one, Vol. 6, H. 4 , e18911.

Muschick, Moritz and Barluenga, Marta and Salzburger, Walter and Meyer, Axel. (2011) Adaptive phenotypic plasticity in the Midas cichlid fish pharyngeal jaw and its relevance in adaptive radiation. BMC evolutionary biology, Vol. 11 , 116.

Rutschmann, S. and Matschiner, M. and Damerau, M. and Muschick, M. and Lehmann, M. F. and Hanel, R. and Salzburger, W.. (2011) Parallel ecological diversification in Antarctic notothenioid fishes as evidence for adaptive radiation. Molecular ecology, Vol. 20, no. 22. pp. 4707-4721.

Salzburger, Walter and Ewing, Greg B. and Von Haeseler, Arndt. (2011) The performance of phylogenetic algorithms in estimating haplotype genealogies with migration. Molecular ecology, Vol. 20, no. 9. pp. 1952-1963.

Svensson, Ola and Egger, Bernd and Gricar, Boye and Woodhouse, Katie and van Oosterhout, Cock and Salzburger, Walter and Seehausen, Ole and Turner, George F.. (2011) Segregation of species-specific male attractiveness in f(2) hybrid lake Malawi cichlid fish. International journal of evolutionary biology, 2011, articleID 426179, 7 S..

Berner, D. and Stutz, W. E. and Bolnick, D. I.. (2010) Foraging trait (co)variances in stickleback evolve deterministically and do not predict trajectories of adaptive diversification. Evolution, Vol. 64, no. 8. pp. 2265-2277.

Berner, Daniel and Roesti, Marius and Hendry, Andrew P. and Salzburger, Walter. (2010) Constrain on speciation suggested by comparing lake-stream stickleback divergence across two continents. Molecular ecology, Vol. 19, no. 22, S. 4963–4978.

Koblmueller, Stephan and Egger, Bernd and Sturmbauer, Christian and Sefc, Kristina M.. (2010) Rapid radiation, ancient incomplete lineage sorting and ancient hybridization in the endemic Lake Tanganyika cichlid tribe Tropheini. Molecular phylogenetics and evolution, Vol. 55, H. 1. pp. 318-334.

Lee, H. J. and Pittlik, S. and Jones, J. C. and Salzburger, W. and Barluenga, M. and Meyer, A.. (2010) Genetic support for random mating between left and right-mouth morphs in the dimorphic scale-eating cichlid fish Perissodus microlepis from Lake Tanganyika. Journal of fish biology, Vol. 76, H. 8. pp. 1940-1957.

Marchetto, Flavio and Zaccara, Serena and Muenzel, Frauke M. and Salzburger, Walter. (2010) Phylogeography of the Italian vairone (Telestes muticellus, Bonaparte 1837) inferred by microsatellite markers : evolutionary history of a freshwater fish species with a restricted and fragmented distribution. BMC evolutionary biology, Vol. 10 , 111.

Muenzel, F. M. and Salzburger, W. and Sanetra, M. and Grabherr, B. and Meyer, A.. (2010) Genetic structure of the vairone Telestes souffia in the eastern part of Lake Constance, central Europe. Journal of fish biology, Vol. 77, H. 5. pp. 1158-1164.

Raeymaekers, J. A. M. and Boisjoly, M. and Delaire, L. and Berner, D. and Räsänen, K. and Hendry, A. P.. (2010) Testing for mating isolation between ecotypes: laboratory experiments with lake, stream and hybrid stickleback. Journal of evolutionary biology, Vol. 23, H. 12 , S. 2694–2708.

Sturmbauer, Christian and Salzburger, Walter and Duftner, Nina and Schelly, Robert and Koblmüller, Stephan. (2010) Evolutionary history of the Lake Tanganyika cichlid tribe Lamprologini (Teleostei: Perciformes) derived from mitochondrial and nuclear DNA data. Molecular phylogenetics and evolution, Vol. 57, H. 1. pp. 266-284.

Berner, D.. (2009) Correction of a bootstrap approach to testing for evolution along lines of least resistance. Journal of evolutionary biology, Vol. 22, H. 12. pp. 2563-2565.

Berner, Daniel and Grandchamp, Anne-Catherine and Hendry, Andrew P.. (2009) Variable progress toward ecological speciation in parapatry : stickleback across eight lake-stream transitions. Evolution, Vol. 63, no. 7. pp. 1740-1753.

Braasch, Ingo and Salzburger, Walter. (2009) In ovo omnia: diversification by duplication in fish and other vertebrates : [minireview]. Journal of biology, Vol. 8 , Art. 25, 5 S..

Egger, Bernd and Mattersdorfer, Karin and Sefc, Kristina M.. (2009) Variable discrimination and asymmetric preferences in laboratory tests of reproductive isolation between cichlid colour morphs. Journal of evolutionary biology, Vol. 23, H. 2. pp. 433-439.

Egger, Bernhard and Steinke, Dirk and Tarui, Hiroshi and De Mulder, Katrien and Arendt, Detlev and Borgonie, Gaëtan and Funayama, Noriko and Gschwentner, Robert and Hartenstein, Volker and Hobmayer, Bert and Hooge, Matthew and Hrouda, Martina and Ishida, Sachiko and Kobayashi, Chiyoko and Kuales, Georg and Nishimura, Osamu and Pfister, Daniela and Rieger, Reinhard and Salvenmoser, Willi and Smith, Julian and Technau, Ulrich and Tyler, Seth and Agata, Kiyokazu and Salzburger, Walter and Ladurner, Peter. (2009) To be or not to be a flatworm : the acoel controversy. PLoS one, Vol. 4, H. 5 , e5502.

Elmer, Kathryn R. and Reggio, Chiara and Wirth, Thierry and Verheyen, Erik and Salzburger, Walter and Meyer, Axel. (2009) Pleistocene desiccation in East Africa bottlenecked but did not extirpate the adaptive radiation of Lake Victoria haplochromine cichlid fishes. Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 32. pp. 13404-13409.

Hendry, Andrew P. and Bolnick, Daniel I. and Berner, Daniel and Peichel, Catherine L.. (2009) Along the speciation continuum in sticklebacks. Journal of fish biology, Vol. 75, H. 8. pp. 2000-2036.

Matschiner, Michael and Hanel, Reinhold and Salzburger, Walter. (2009) Gene flow by larval dispersal in the Antarctic notothenioid fish Gobionotothen gibberifrons. Molecular ecology, Vol. 18, no. 12. pp. 2574-2587.

Matschiner, Michael and Salzburger, Walter. (2009) TANDEM: integrating automated allele binning into genetics and genomics workflows. Bioinformatics, Vol. 25, H. 15. pp. 1982-1983.

Salzburger, Walter. (2009) The interaction of sexually and naturally selected traits in the adaptive radiations of cichlid fishes. Molecular Ecology, 18 (2). pp. 169-185.

Salzburger, Walter and Steinke, Dirk and Braasch, Ingo and Meyer, Axel. (2009) Genome desertification in eutherians : can gene deserts explain the uneven distribution of genes in placental mammalian genomes? Journal of molecular evolution, Vol. 69, H. 3. pp. 207-216.

Abila, Romulus and Salzburger, Walter and Ndonga, Millicent Florence and Owiti, Dickson Otieno and Barluenga, Marta and Meyer, Axel. (2008) The role of the Yala swamp lakes in the conservation of Lake Victoria region haplochromine cichlids : evidence from genetic and trophic ecology studies. Lakes and reservoirs, Vol. 13. pp. 95-104.

Salzburger, Walter. (2008) To be or not to be a hamlet pair in sympatry. Molecular ecology, Vol. 17, no. 6. pp. 1397-1399.

Salzburger, Walter and Renn, Susan C. P. and Steinke, Dirk and Braasch, Ingo and Hofmann, Hans A. and Meyer, Axel. (2008) Annotation of expressed sequence tags for the East African cichlid fish Astatotilapia burtoni and evolutionary analyses of cichlid ORFs. BMC Genomics, Vol. 9 , 96.

Berner, D. and Blanckenhorn, W. U.. (2006) Grasshopper ontogeny in relation to time constraints : adaptive divergence and stasis. The journal of animal ecology, Vol. 75, H. 1. pp. 130-139.

Book

Hofer, Hans and Salzburger, Walter. (2008) Biologie 8. Wien.

Book Section

Salzburger, Walter and Ziemeck, Hans-Peter. (2012) Buntbarsche : Modellorganismen für die wissenschaftsorientierte Bearbeitung der Evolutionsbiologie in der Schule. In: Evolutionsbiologie : moderne Themen für den Unterricht. Heidelberg, pp. 259-277.

Matschiner, Michael and Hanel, Reinhold and Salzburger, Walter. (2010) Phylogeography and speciation processes in marine fishes and fishes from large freshwater lakes. In: Phylogeography: concepts, intraspecific patterns, and speciation processes. New York, pp. 1-29.

Thesis

Gu, Langyu. Genetic basis of innovative anal fin pigmentation patterns in cichlid fish. 2016, Doctoral Thesis, University of Basel, Faculty of Science.

Moser, Dario. Population divergence between European lake and stream threespine stickleback. 2016, Doctoral Thesis, University of Basel, Faculty of Science.

Colombo, Marco. Morphology and ecology during the course of teleost adaptive radiations. 2015, Doctoral Thesis, University of Basel, Faculty of Science.

Heule, Corina. The genetics of sexual development in East African cichlid fishes. 2015, Doctoral Thesis, University of Basel, Faculty of Science.

Meyer, Britta Silke. A multi-marker perspective on the evolutionary history of East African cichlid fishes. 2015, Doctoral Thesis, University of Basel, Faculty of Science.

Vogt, Kristina. Olfactory communication and hunting behaviour of Eurasian lynx Lynx lynx in the Northwestern Swiss Alps. 2015, Doctoral Thesis, University of Basel, Faculty of Science.

Cortesi, Fabio. Ecological and molecular insights into the function of colourful signals in aquatic environments. 2014, Doctoral Thesis, University of Basel, Faculty of Science.

Diepeveen, Eveline Tamara. Evolutionary genetics of naturally and sexually selected traits in cichlid fishes. 2014, Doctoral Thesis, University of Basel, Faculty of Science.

Indermaur, Adrian. Comparative ecology and phylogeography in east African cichild fishes. 2014, Doctoral Thesis, University of Basel, Faculty of Science.

Pombo dos Santos, Maria Emília. Molecular basis of a novel pigment trait in cichlid fishes. 2014, Doctoral Thesis, University of Basel, Faculty of Science.

Roesti, Marius. Genomics of adaptation revealed in threespine stickleback. 2014, Doctoral Thesis, University of Basel, Faculty of Science.

Theis, Anya. Naturally and sexually selected traits in haplochromine cichlid fishes. 2014, Doctoral Thesis, University of Basel, Faculty of Science.

Muschick, Moritz. Convergence and plasticity in the adaptive radiation of cichlid fishes. 2013, Doctoral Thesis, University of Basel, Faculty of Science.

Matschiner, Michael. Population genetic and phylogenetic insights into the adaptive radiation of Antarctic notothenioid fishes. 2011, Doctoral Thesis, University of Basel, Faculty of Science.