Items where Division is "05 Faculty of Science > Departement Biozentrum > Structural Biology & Biophysics > Nanobiology Argovia (Lim)"

2017

Emilsson, Gustav and Schoch, Rafael L. and Oertle, Philipp and Xiong, Kunli and Lim, Roderick Y. H. and Dahlin, Andreas B.. (2017) Surface plasmon resonance methodology for monitoring polymerization kinetics and morphology changes of brushes - evaluated with poly(N-isopropylacrylamide). Applied Surface Science, 396. pp. 384-392.

Gerspach, Michael Adrian. Nanofluidic systems for individual and contact-free electrostatic trapping of charged objects. 2017, Doctoral Thesis, University of Basel, Faculty of Science.

Kapinos, Larisa E. and Huang, Binlu and Rencurel, Chantal and Lim, Roderick Y. H.. (2017) Karyopherins regulate nuclear pore complex barrier and transport function. Journal of Cell Biology, 216 (11). pp. 3609-3624.

Luo, Wangxi and Ruba, Andrew and Takao, Daisuke and Zweifel, Ludovit P. and Lim, Roderick Y. H. and Verhey, Kristen J. and Yang, Weidong. (2017) Axonemal Lumen Dominates Cytosolic Protein Diffusion inside the Primary Cilium. Scientific Reports, 7. p. 15793.

Sakiyama, Yusuke and Panatala, Radhakrishnan and Lim, Roderick Y. H.. (2017) Structural dynamics of the nuclear pore complex. Seminars in Cell and Developmental Biology, 68. pp. 27-33.

2016

Reyes Lua, Magaly and Oertle, Philipp and Camenzind, Leon and Goz, Alexandra and Meyer, Carsten H. and Konieczka, Katarzyna and Loparic, Marko and Halfter, Willi and Henrich, Paul Bernhard. (2016) Superior Rim Stability of the Lens Capsule Following Manual Over Femtosecond Laser Capsulotomy. Investigative Ophthalmology & Visual Science, 57 (6). pp. 2839-2849.

Sakiyama, Yusuke and Mazur, Adam and Kapinos, Larisa E. and Lim, Roderick Y. H.. (2016) Spatiotemporal dynamics of the nuclear pore complex transport barrier resolved by high-speed atomic force microscopy. Nature Nanotechnology (11). pp. 719-723.

Vovk, Andrei and Gu, Chad and Opferman, Michael G. and Kapinos, Larisa E. and Lim, Roderick Y. H. and Coalson, Rob D. and Jasnow, David and Zilman, Anton. (2016) Simple biophysics underpins collective conformations of the intrinsically disordered proteins of the Nuclear Pore Complex. eLife, 5. e10785.

Vujica, Suncica and Zelmer, Christina and Panatala, Radhakrishnan and Lim, Roderick Y. H.. (2016) Nucleocytoplasmic Transport: A Paradigm for Molecular Logistics in Artificial Systems. Chimia, 70 (6). pp. 413-417.

Zweifel, Ludovit P. and Shorubalko, Ivan and Lim, Roderick Y. H.. (2016) Helium scanning transmission ion microscopy and electrical characterization of glass nanocapillaries with reproducible tip geometries. ACS nano, 10 (2). pp. 1918-1925.

2015

Emilsson, Gustav and Schoch, Rafael L. and Feuz, Laurent and Höök, Fredrik and Lim, Roderick Y. H. and Dahlin, Andreas B.. (2015) Strongly Stretched Protein Resistant Poly(ethylene glycol) Brushes Prepared by Grafting-To. ACS applied materials & interfaces, Vol. 7, H. 14. pp. 7505-7515.

Lim, Roderick Y. H. and Huang, Binlu and Kapinos, Larisa E.. (2015) How to operate a nuclear pore complex by Kap-centric control. Nucleus (Austin, Tex.), 6 (5). pp. 366-372.

Plodinec, Marija and Lim, Roderick Y. H.. (2015) Nanomechanical characterization of living mammary tissues by atomic force microscopy. Methods in Molecular Biology, Vol. 1293. pp. 231-246.

Schoch, Rafael L.. Resolving conformational changes in FG nucleoporins due to multivalent Karyopherin binding. 2015, Doctoral Thesis, University of Basel, Faculty of Science.

Wagner, Raphael S. and Kapinos, Larisa E. and Marshall, Neil J. and Stewart, Murray and Lim, Roderick Y. H.. (2015) Promiscuous Binding of Karyopherinβ1 Modulates FG Nucleoporin Barrier Function and Expedites NTF2 Transport Kinetics. Biophysical journal, 108 (4). pp. 918-927.

2014

Fuxreiter, Monika and Tóth-Petróczy, Agnes and Kraut, Daniel A. and Matouschek, Andreas T. and Lim, Roderick Y. H. and Xue, Bin and Kurgan, Lukasz and Uversky, Vladimir N.. (2014) Disordered Proteinaceous Machines. Chemical reviews, Vol. 114, H. 13 , S. 6806–6843.

Hyötylä, Janne T.. Nanomechanics of confined polymer systems. 2014, Doctoral Thesis, University of Basel, Faculty of Science.

Kapinos, Larisa E. and Schoch, Rafael L. and Wagner, Raphael S. and Schleicher, Kai D. and Lim, Roderick Y. H.. (2014) Karyopherin-centric control of nuclear pores based on molecular occupancy and kinetic analysis of multivalent binding with FG nucleoporins. Biophysical journal, Vol. 106, H. 8. pp. 1751-1762.

Schleicher, Kai D.. Reduction of dimensionality in Karyopherinβ1 mediated transport on FG domains. 2014, Doctoral Thesis, University of Basel, Faculty of Science.

Schleicher, Kai D. and Dettmer, Simon D. and Kapinos, Larisa E. and Pagliara, Stefano and Keyser, Ulrich F. and Jeney, Sylvia and Lim, Roderick Y. H.. (2014) Selective transport control on molecular velcro made from intrinsically disordered proteins. Nature nanotechnology, Vol. 9 H. 7 , S. 525–530.

Wagner, Raphael S.. Kap-Centric control of nuclear pores based on promiscuous binding to FG nucleoporins. 2014, Doctoral Thesis, University of Basel, Faculty of Science.

2013

Halfter, W. and Monnier, C. and Mueller, D. and Oertle, P. and Uechi, G. and Balasubramani, M. and Safi, F. and Lim, R. and Loparic, M. and Henrich, P. B.. (2013) The Bi-Functional Organization of Human Basement Membranes. PLoS one, Vol. 8, H. 7 , e67660.

Schoch, Rafael L. and Lim, Roderick Y. H.. (2013) Non-interacting molecules as innate structural probes in surface plasmon resonance. Langmuir, Vol. 29, H. 12. pp. 4068-4076.

Yang, Liu and Munck, Martina and Swaminathan, Karthic and Kapinos, Larisa E. and Noegel, Angelika A. and Neumann, Sascha. (2013) Mutations in LMNA Modulate the Lamin A - Nesprin-2 Interaction and Cause LINC Complex Alterations. PLoS one, Vol. 8, H. 8 , e71850.

2012

Henrich, P. B. and Monnier, C. A. and Halfter, W. and Haritoglou, C. and Strauss, R. W. and Lim, R. Y. H. and Loparic, M.. (2012) Nanoscale topographic and biomechanical studies of the human internal limiting membrane. Investigative ophthalmology & visual science, Vol. 53. pp. 2561-2570.

Hyotyla, J. T. and Lim, R. Y. H.. (2012) Atomic force microscopy. In: Supramolecular chemistry. From molecules to nanomaterials, Vol. 2: Techniques. Oxford, pp. 659-668.

Lim, R. Y. H. and Herrmann, H.. (2012) From structural architecture to cellular organization : celebrating the scientific contributions of Ueli Aebi on the occasion of his retirement. Journal of structural biology, Vol. 177, H. 1. pp. 1-2.

Plodinec, M. and Loparic, M. and Monnier, C. A. and Obermann, E. C. and Zanetti-Dallenbach, R. and Oertle, P. and Hyotyla, J. T. and Aebi, U. and Bentires-Alj, M. and Lim, R. Y. H. and Schoenenberger, C. -A.. (2012) The nanomechanical signature of breast cancer. Nature nanotechnology, Vol. 7, H. 11. pp. 757-765.

Schoch, Rafael L. and Kapinos, Larisa E. and Lim, Roderick Y. H.. (2012) Nuclear transport receptor binding avidity triggers a self-healing collapse transition in FG-nucleoporin molecular brushes. Proceedings of the National Academy of Sciences of the United States of America, Vol. 109, H. 42. pp. 16911-16916.

2011

Hyotyla, J. T. and Deng, J. and Lim, R. Y. H.. (2011) Synthetic Protein Targeting by the Intrinsic Biorecognition Functionality of Poly(ethylene glycol) Using PEG Antibodies as Biohybrid Molecular Adaptors. ACS nano, Vol. 5, H. 6. pp. 5180-5187.

Kowalczyk, S. W. and Kapinos, L. and Blosser, T. R. and Magalhaes, T. and van Nies, P. and Lim, R. Y. H. and Dekker, C.. (2011) Single-molecule transport across an individual biomimetic nuclear pore complex. Nature Nanotechnology, Vol. 6, H. 7. pp. 433-438.

2010

Backmann, Natalija and Kappeler, Natascha and Braun, Thomas and Huber, François and Lang, Hans-Peter and Gerber, Christoph and Lim, Roderick Y. H.. (2010) Sensing surface PEGylation with microcantilevers. Beilstein Journal of Nanotechnology, 1. pp. 3-13.

Peleg, O. and Lim, R. Y. H.. (2010) Converging on the function of intrinsically disordered nucleoporins in the nuclear pore complex. Biological Chemistry, 391 (7). pp. 719-730.

2009

Elad, N. and Maimon, T. and Frenkiel-Krispin, D. and Lim, R. Y. H. and Medalia, O.. (2009) Structural analysis of the nuclear pore complex by integrated approaches. Current Opinion in Structural Biology, Vol. 19, H. 2. pp. 226-232.

Lim, R. Y. H. and Deng, J.. (2009) Interaction forces and reversible collapse of a polymer brush-gated nanopore. ACS nano, Vol. 3, no. 10. pp. 2911-2918.

2008

Lim, R. Y. H. and Aebi, U. and Fahrenkrog, B.. (2008) Towards reconciling structure and function in the nuclear pore complex. Histochemistry and cell biology, Vol. 129, H. 2. pp. 105-116.

2007

Lim, R. Y. H.. (2007) Gate-crashing the nuclear pore complex. Structure: with folding and design, Vol. 15, H. 8. pp. 889-891.

Lim, R. Y. H. and Fahrenkrog, B. and Koser, J. and Schwarz-Herion, K. and Deng, J. and Aebi, U.. (2007) Nanomechanical basis of selective gating by the nuclear pore complex. Science, Vol. 318, no. 5850. pp. 640-643.

Lim, R. Y. H. and Koser, J. and Huang, N. -P. and Schwarz-Herion, K. and Aebi, U.. (2007) Nanomechanical interactions of phenylalanine-glycine nucleoporins studied by single molecule force-volume spectroscopy. Journal of Structural Biology, Vol. 159, H. 2. pp. 277-289.

2006

Lim, R. Y. H. and Aebi, U. and Stoffler, D.. (2006) From the trap to the basket : getting to the bottom of the nuclear pore complex. Chromosoma, Vol. 115, H. 1. pp. 15-26.

Lim, R. Y. H. and Fahrenkrog, B.. (2006) The nuclear pore complex up close. Current opinion in cell biology, Vol. 18, H. 3. pp. 342-347.

Lim, R. Y. H. and Huang, N. -P. and Koser, J. and Deng, J. and Lau, K. H. A. and Schwarz-Herion, K. and Fahrenkrog, B. and Aebi, U.. (2006) Flexible phenylalanine-glycine nucleoporins as entropic barriers to nucleocytoplasmic transport. Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, H. 25. pp. 9512-9517.

2005

Lim, R. Y. H. and Aebi, U.. (2005) In silico access to the nuclear pore complex. Structure: with folding and design, Vol. 13, H. 12. pp. 1741-1743.

2004

Lim, Roderick Y. H. and O'Shea, S. J.. (2004) Discrete solvation layering in confined binary liquids. Langmuir, 20 (12). pp. 4916-4919.

2002

Lim, R. and Li, S. F. Y. and O'Shea, S. J.. (2002) Solvation forces using sample-modulation atomic force microscopy. Langmuir, 18 (16). pp. 6116-6124.

Lim, R. and O'Shea, S. J.. (2002) Solvation forces in branched molecular liquids. Physical Review Letters, 88 (24). p. 246101.

Loh, K. P. and Xie, X. N. and Lim, Y. H. and Teo, E. J. and Zheng, J. C. and Ando, T.. (2002) Surface oxygenation studies on (100)-oriented diamond using an atom beam source and local anodic oxidation. Surface Science, 505. pp. 93-114.

Tripathy, S. and Chua, S. J. and Ramam, A. and Sia, E. K. and Pan, J. S. and Lim, R. and Yu, G. and Shen, Z. X.. (2002) Electronic and vibronic properties of Mg-doped GaN: The influence of etching and annealing. Journal of Applied Physics, 91 (5). pp. 3398-3407.

2001

Xie, X. N. and Lim, R. and Li, J. and Li, S. F. Y. and Loh, K. P.. (2001) Atomic hydrogen beam etching of carbon superstructures on 6H-SiC(0001) studied by reflection high-energy electron diffraction. Diamond and Related Materials, 10 (3-7). pp. 1218-1223.

2000

Lim, R. and Li, J. and Li, S. F. Y. and Feng, Z. and Valiyaveettil, S.. (2000) The formation of two-dimensional supramolecular chiral lamellae by diamide molecules at the solution/graphite interface: A scanning tunneling microscopy study. Langmuir, 16 (17). pp. 7023-7030.

1998

Kornilova, S. and Hackl, E. and Kapinos Schneider, Larisa E. E and Andrushchenko, V. and Blagoi, Y.. (1998) DNA interaction with biologically active metal ions. Cooperativity of metal ion binding and compacting of DNA. Acta Biochimica Polonica, 45 (1). pp. 107-117.

1997

Andrushchenko, V. V. and Kornilova, S. V. and Kapinos, L. E. and Hackl, E. V. and Galkin, V. L. and Grigoriev, D. N. and Blagoi, Y. P.. (1997) IR-spectroscopic studies of divalent metal ion effects on DNA hydration. Journal of molecular structure, Vol. 408-409. pp. 225-228.

Hackl, E. V. and Kornilova, S. V. and Kapinos, L. E. and Andrushchenko, V. V. and Galkin, V. L. and Grigoriev, D. N. and Blagoi, Y. P.. (1997) Study of Ca2+, Mn2+and Cu2+ binding to DNA in solution by means of IR spectroscopy. Journal of Molecular Structure , 408. pp. 229-232.

Kornilova, S. V. and Iasem, P. and Grigor'ev, D. N. and Kapinos, L. E. and Totova, Ia and Blagoĭ, Iu P.. (1997) Kalorimetricheskoe issledovanie vliianiia ionov Ca2+ i Mn2+ na perekhodspiral'-klubok v DNK. Biofizika, 42 (3). pp. 599-606.

Kornilova, S. V. and Miskovsky, P. and Tomkova, A. and Kapinos, L. E. and Hackl, E. V. and Andrushchenko, V. V. and Grigoriev, D. N. and Blagoi, Y. P.. (1997) Vibrational spectroscopic studies of the divalent metal ion effect on DNA structural transitions. Journal of Molecular Structure , 408. pp. 219-223.

1995

Kornilova, S. V. and Kapinos Schneider, Larisa E. E and Blagoĭ, Iu. P.. (1995) Izuchenie vzaimodeĭstviia DNK s ionami kal'tsiia metodom kolebatel'noĭ spektroskopii. Molekulyarnaya Biologiya, 29 (3). pp. 574-584.

1994

Blagoĭ, Iu P. and Kornilova, S. V. and Leont'ev, V. S. and Sorokin, V. A. and Gladchenko, G. O. and Valeev, V. A. and Grigor'ev, D. N. and Kapinos, L. E. and Bondarenko, V. N. and Kolod, V. Ia. (1994) Strukturnye i fiziko-khimicheskie kharakteristiki DNK iz tkaneǐ zhivotnykh, podvergavshikhsia dlitel'nomu khronicheskomu oblucheniiu v zone chernobylia. Biofizika, 39 (4). pp. 637-645.

Kornilova, S. V. and Kapinos, L. E. and Tomkova, A. and Mishkovskiĭ, P. and Blagoĭ, Iu. P. and Bol'bukh, T. V.. (1994) Izuchenie metodami IK- i Ramanovskoǐ spektroskopii vzaimodeǐstviia DNK s ionami medi. Biofizika, 39 (3). pp. 423-436.

1993

Kornilova, S. A. and Kapinos, L. E. and Blagoĭ, Iu. P.. (1993) Studies on DNA interaction with manganese ions by IR spectroscopy. Molekulyarnaya Biologiya, 27 (6). pp. 1276-1286.